RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 GPR27Q9NS67 375 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 ARHGAP21Q5T5U3 1957 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 A0A0U1RQV5 110 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 PMS2P1A4D2B8 440 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 SERPINA7P05543 415 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 MMP7P09237 267 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-203ENST00000429490 PGA5P0DJD9 388 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 DSCR4P56555 118 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-203ENST00000429490 ENDOGQ14249 297 aaKnown RBP11.91□□□□□ -0.5
SGMS1-203ENST00000429490 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.91□□□□□ -0.5
SGMS1-203ENST00000429490 AGBL5Q8NDL9 886 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 HLA-CQ95604 372 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 MALSU1Q96EH3 234 aa11.91□□□□□ -0.5
SGMS1-203ENST00000429490 DEGS1O15121 323 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 CCL4P13236 92 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 VDAC1P21796 283 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 MPZP25189 248 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 THOC3Q96J01 351 aaKnown RBP11.9□□□□□ -0.5
SGMS1-203ENST00000429490 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
SGMS1-203ENST00000429490 C1orf147Q96MC9 270 aaPredicted RBP11.9□□□□□ -0.5
SGMS1-203ENST00000429490 A0A1W2PNV4 684 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 OR6C6A6NF89 314 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 SHISA7A6NL88 538 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 SEC14L6B5MCN3 397 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 TRDCB7Z8K6 153 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 RAC2P15153 192 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 DTYMKP23919 212 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 LAMA1P25391 3075 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 PSG4Q00888 419 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 PRDX4Q13162 271 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 GAMTQ14353 236 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 OR10D3Q8NH80 312 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 CA5BP1Q8WTZ4 195 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 WFIKKN1Q96NZ8 548 aa11.9□□□□□ -0.5
SGMS1-203ENST00000429490 CBR3O75828 277 aa11.9□□□□□ -0.51
SGMS1-203ENST00000429490 G0S2P27469 103 aa11.9□□□□□ -0.51
SGMS1-203ENST00000429490 APLNRP35414 380 aa11.9□□□□□ -0.51
SGMS1-203ENST00000429490 CALHM1Q8IU99 346 aa11.9□□□□□ -0.51
SGMS1-203ENST00000429490 ADGRG7Q96K78 797 aa11.9□□□□□ -0.51
SGMS1-203ENST00000429490 PATZ1Q9HBE1 687 aaKnown RBP11.9□□□□□ -0.51
SGMS1-203ENST00000429490 NBASA2RRP1 2371 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 MAP1LC3B2A6NCE7 125 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 UBE2CO00762 179 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 NXPH2O95156 264 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 SRFP11831 508 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 ARF1P84077 181 aaKnown RBP11.89□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF816Q0VGE8 651 aaPredicted RBP11.89□□□□□ -0.51
SGMS1-203ENST00000429490 SPNS3Q6ZMD2 512 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 KMT5CQ86Y97 462 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 Q8WTZ3 238 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 BOD1Q96IK1 185 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 MAP1LC3BQ9GZQ8 125 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 KIAA1456Q9P272 454 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 IL36RNQ9UBH0 155 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 CADP27708 2225 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 FREM1Q5H8C1 2179 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 WDFY4Q6ZS81 3184 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 OR5H1A6NKK0 313 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 CHRNA7P36544 502 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 PSMB3P49720 205 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 RAB4BP61018 213 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 CLN3Q13286 438 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 ZDHHC23Q8IYP9 409 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
SGMS1-203ENST00000429490 DUSP23Q9BVJ7 150 aa11.89□□□□□ -0.51
SGMS1-203ENST00000429490 A0A1B0GV90 55 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 A0A1W2PPV4 95 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 A0A1W2PR77 199 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 CDS2O95674 445 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 PSG2P11465 335 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 FAM89BQ8N5H3 189 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 LIME1Q9H400 295 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 DENND4AQ7Z401 1863 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 TRGC1P0CF51 173 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 RNF224P0DH78 156 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 RPS2P15880 293 aaKnown RBP11.88□□□□□ -0.51
SGMS1-203ENST00000429490 FKBP2P26885 142 aaKnown RBP11.88□□□□□ -0.51
SGMS1-203ENST00000429490 RBM11P57052 281 aaKnown RBP11.88□□□□□ -0.51
SGMS1-203ENST00000429490 RAC1P63000 192 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF818PQ6ZRF7 136 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
SGMS1-203ENST00000429490 OR13D1Q8NGV5 346 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 FAM131CQ96AQ9 280 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 FBLN5Q9UBX5 448 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 CFPP27918 469 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 CDX1P47902 265 aaPredicted RBP11.88□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF441Q8N8Z8 693 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 MOB3AQ96BX8 217 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM222Q9H0R3 208 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 UCK1Q9HA47 277 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 PISDQ9UG56 409 aa11.88□□□□□ -0.51
SGMS1-203ENST00000429490 H3F3AP84243 136 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 SMRP1Q8NCR6 262 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 GINS3Q9BRX5 216 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 OPA3Q9H6K4 179 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms