RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 ZNF732B4DXR9 585 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 UBE2CO00762 179 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 SLC34A2O95436 690 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 P04436 131 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 CCL1P22362 96 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 RPUSD4Q96CM3 377 aaKnown RBP10.75□□□□□ -0.69
CDH3-202ENST00000429102 TM2D1Q9BX74 207 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 UFSP2Q9NUQ7 469 aa10.75□□□□□ -0.69
CDH3-202ENST00000429102 TUSC2O75896 110 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 IGLV3-19P01714 112 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 G0S2P27469 103 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 CLDN15P56746 228 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 ARL6IP1Q15041 203 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 FAM53AQ6NSI3 398 aaPredicted RBP10.74□□□□□ -0.69
CDH3-202ENST00000429102 OIT3Q8WWZ8 545 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 GFOD1Q9NXC2 390 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 LIFP15018 202 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 ADIRFQ15847 76 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 MRPL21Q7Z2W9 205 aaKnown RBP10.74□□□□□ -0.69
CDH3-202ENST00000429102 CPEB3Q8NE35 698 aaKnown RBP10.74□□□□□ -0.69
CDH3-202ENST00000429102 RHBDD1Q8TEB9 315 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 SSX3Q99909 188 aa10.74□□□□□ -0.69
CDH3-202ENST00000429102 LAMA5O15230 3695 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 A0A0G2JRQ6 117 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 FOXI3A8MTJ6 420 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 IGHV3-13P01766 116 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 IGHV3-7P01780 117 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 TFF1P04155 84 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 PSG2P11465 335 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 ZNF266Q14584 549 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 BATFQ16520 125 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 LILRB2Q8N423 598 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 GINS3Q9BRX5 216 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 HES7Q9BYE0 225 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 C9J4A7 227 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 PGA5P0DJD9 388 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 IDH3GP51553 393 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 PMP22Q01453 160 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 HMGN3Q15651 99 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 WDR74Q6RFH5 385 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 CXorf67Q86X51 503 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 SCGB1C1Q8TD33 95 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 SSC4DQ8WTU2 575 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 SPSB1Q96BD6 273 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 TCEAL7Q9BRU2 100 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 OR14J1Q9UGF5 321 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 ANAPC10Q9UM13 185 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 POMT1Q9Y6A1 747 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 SIRPB1O00241 398 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 MMP7P09237 267 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 FIP1L1Q6UN15 594 aaKnown RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 ZNF600Q6ZNG1 722 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 ZNF808Q8N4W9 903 aaPredicted RBP10.73□□□□□ -0.69
CDH3-202ENST00000429102 HIST1H2AAQ96QV6 131 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 OR51M1Q9H341 326 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 PLEKHF2Q9H8W4 249 aa10.73□□□□□ -0.69
CDH3-202ENST00000429102 TRDCB7Z8K6 153 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 LILRA1O75019 489 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 IFNA5P01569 189 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 CELA3AP09093 270 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 CXCL12P48061 93 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 RBM11P57052 281 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 GAMTQ14353 236 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 PCOLCEQ15113 449 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 HIST3H3Q16695 136 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 FAM27BQ5VT28 67 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 LINC00696Q6ZRV3 163 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 ZNF610Q8N9Z0 462 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 C18orf12Q96KH6 178 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 NUDT16L1Q9BRJ7 211 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 WNT5BQ9H1J7 359 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 TMEM38BQ9NVV0 291 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 LRP4O75096 1905 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 NPIPB13A6NJU9 1138 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 NPIPB4C9JG80 1138 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 K7N7A8 449 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 SYNGR3O43761 229 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 CYTIPO60759 359 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 MRPL33O75394 65 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 NR2C1P13056 603 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 HNF1AP20823 631 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 DSCR4P56555 118 aaPredicted RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 ARF1P84077 181 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 IL13RA2Q14627 380 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 LHFPL2Q6ZUX7 228 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 IFI44Q8TCB0 444 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 MOB3AQ96BX8 217 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 CACNG5Q9UF02 275 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 TMED3Q9Y3Q3 217 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 ERVS71-1P61550 626 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 PRDX4Q13162 271 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 RAB35Q15286 201 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 UNQ6494/PRO21346Q6UXR6 183 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 C20orf204Q6ZNR8 217 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 ZNF100Q8IYN0 542 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 SELENOHQ8IZQ5 122 aaKnown RBP10.72□□□□□ -0.69
CDH3-202ENST00000429102 OR2H1Q9GZK4 316 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 OR1A1Q9P1Q5 309 aa10.72□□□□□ -0.69
CDH3-202ENST00000429102 METTL1Q9UBP6 276 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms