RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 M0QZK8 103 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 CDRT1O95170 752 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 C21orf33P30042 268 aaPredicted RBP13.58□□□□□ -0.24
TRIM39-209ENST00000428728 DIAPH2-AS1Q14236 149 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 KLHL22Q53GT1 634 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 DDI2Q5TDH0 399 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 DRAM1Q8N682 238 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 GPR148Q8TDV2 347 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 TMEM106AQ96A25 262 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 S100A14Q9HCY8 104 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 PSG11Q9UQ72 335 aa13.58□□□□□ -0.24
TRIM39-209ENST00000428728 A0A1W2PPE3 182 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 FAM106CPP0CH98 169 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 SERPINA2P20848 420 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 ETV1P50549 477 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 PPP3R1P63098 170 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 SLC35A2P78381 396 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 MADCAM1Q13477 382 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 OR2G6Q5TZ20 316 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 C10orf67Q8IYJ2 551 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 SUMF2Q8NBJ7 301 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 HAVCR2Q8TDQ0 301 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 ORAI1Q96D31 301 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 DPCDQ9BVM2 203 aaPredicted RBP13.57□□□□□ -0.24
TRIM39-209ENST00000428728 MRPS18AQ9NVS2 196 aaKnown RBP13.57□□□□□ -0.24
TRIM39-209ENST00000428728 ING4Q9UNL4 249 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
TRIM39-209ENST00000428728 PSMB11A5LHX3 300 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 WBP4O75554 376 aaKnown RBP13.56□□□□□ -0.24
TRIM39-209ENST00000428728 OR7C1O76099 320 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-209ENST00000428728 MPIG6BO95866 241 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 TMEM11P17152 192 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 KCNJ3P48549 501 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 RBM11P57052 281 aaKnown RBP13.56□□□□□ -0.24
TRIM39-209ENST00000428728 HNF4GQ14541 408 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 RPL22L1Q6P5R6 122 aaKnown RBP13.56□□□□□ -0.24
TRIM39-209ENST00000428728 ZNF329Q86UD4 541 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 OSR2Q8N2R0 312 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 ZNF555Q8NEP9 628 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 WFDC9Q8NEX5 89 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 OR13C5Q8NGS8 318 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 OR10X1Q8NGY0 326 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 UBALD1Q8TB05 177 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 NCOR1P1Q9H4R4 102 aa13.56□□□□□ -0.24
TRIM39-209ENST00000428728 FGF20Q9NP95 211 aaPredicted RBP13.56□□□□□ -0.24
TRIM39-209ENST00000428728 NPIPB11E5RHQ5 1161 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 BAG2O95816 211 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 CLIC3O95833 236 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 CSTBP04080 98 aaKnown RBP13.55□□□□□ -0.24
TRIM39-209ENST00000428728 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-209ENST00000428728 RAB7AP51149 207 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 TMPRSS11AQ6ZMR5 421 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 C5orf56Q8N8D9 126 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 Q8NFD4 153 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 OR52N1Q8NH53 320 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 NEK7Q8TDX7 302 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 S100A13Q99584 98 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 METTL9Q9H1A3 318 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 LINC00574Q9H8X3 128 aa13.55□□□□□ -0.24
TRIM39-209ENST00000428728 SMPD3Q9NY59 655 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-209ENST00000428728 SIRT4Q9Y6E7 314 aaPredicted RBP13.55□□□□□ -0.24
TRIM39-209ENST00000428728 A0A1W2PP11 408 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A9PA6NNJ1 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 GEMIN2O14893 280 aaKnown RBP13.54□□□□□ -0.24
TRIM39-209ENST00000428728 IGKV1D-33P01593 117 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 IGKV1-33P01594 117 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 BDKRB2P30411 391 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 REG1BP48304 166 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 PAX5Q02548 391 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 CCDC58Q4VC31 144 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 ASCL4Q6XD76 172 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 THNSL2Q86YJ6 484 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 OR8H3Q8N146 312 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 SMIM19Q96E16 107 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 NOL4LQ96MY1 436 aaPredicted RBP13.54□□□□□ -0.24
TRIM39-209ENST00000428728 TMEM138Q9NPI0 162 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 IL36GQ9NZH8 169 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 LINC00527Q9UJ94 153 aa13.54□□□□□ -0.24
TRIM39-209ENST00000428728 IGHV3-72A0A0B4J1Y9 119 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 TMEM30CPA0ZSE6 113 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 MAGEA13PA6NCF6 341 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 HSD17B6O14756 317 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 LALBAP00709 142 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 MYL12AP19105 171 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 DCKP27707 260 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 SLC22A6Q4U2R8 563 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 ZFP41Q8N8Y5 198 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 OR10A7Q8NGE5 316 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 CCDC107Q8WV48 283 aa13.53□□□□□ -0.24
TRIM39-209ENST00000428728 RCC1LQ96I51 464 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms