RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 C21orf33P30042 268 aaPredicted RBP13.03□□□□□ -0.32
VARS-216ENST00000428445 MYCNOSP40205 109 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 REG1BP48304 166 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 LUMP51884 338 aaPredicted RBP13.03□□□□□ -0.32
VARS-216ENST00000428445 PAX5Q02548 391 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 KISS1Q15726 138 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 ELP2Q6IA86 826 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 SYS1Q8N2H4 156 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 OR51T1Q8NGJ9 327 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 OR10K1Q8NGX5 313 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 UBALD1Q8TB05 177 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 CHPT1Q8WUD6 406 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 PELI1Q96FA3 418 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 CPNE2Q96FN4 548 aaPredicted RBP13.03□□□□□ -0.32
VARS-216ENST00000428445 PRR25Q96S07 402 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 ASCL2Q99929 193 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 BARHL1Q9BZE3 327 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 GPR61Q9BZJ8 451 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 LINC00574Q9H8X3 128 aa13.03□□□□□ -0.32
VARS-216ENST00000428445 H0YHG0 523 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 ALPLP05186 524 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 RPLP1P05386 114 aaKnown RBP13.02□□□□□ -0.33
VARS-216ENST00000428445 SLC6A1P30531 599 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 SSTR5P35346 364 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 KCNJ3P48549 501 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 MTNR1BP49286 362 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 GALEQ14376 348 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 PAN3Q58A45 887 aaKnown RBP13.02□□□□□ -0.33
VARS-216ENST00000428445 SLC35E3Q7Z769 313 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 LHFPL3Q86UP9 236 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 STPG2Q8N412 459 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 PARP16Q8N5Y8 322 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 PXT1Q8NFP0 134 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 OR10A7Q8NGE5 316 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 C4orf36Q96KX1 117 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 ISG20L2Q9H9L3 353 aaKnown RBP13.02□□□□□ -0.33
VARS-216ENST00000428445 ZFP57Q9NU63 452 aa13.02□□□□□ -0.33
VARS-216ENST00000428445 AMMECR1Q9Y4X0 333 aaPredicted RBP13.02□□□□□ -0.33
VARS-216ENST00000428445 TMEM212A6NML5 194 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 E9PI62 339 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 CCL24O00175 119 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 MPZL2O60487 215 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 CIB2O75838 187 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 IGHG2P01859 326 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 DGCR2P98153 550 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 MADCAM1Q13477 382 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 PIGYQ3MUY2 71 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 NKAPLQ5M9Q1 402 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 ZNF691Q5VV52 312 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 RSBN1Q5VWQ0 802 aaPredicted RBP13.01□□□□□ -0.33
VARS-216ENST00000428445 UNQ9370/PRO34162Q6UXP9 181 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 MOB3BQ86TA1 216 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 SATL1Q86VE3 508 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 ZNF695Q8IW36 515 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 C10orf67Q8IYJ2 551 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 Q8NFD4 153 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 CNIH3Q8TBE1 160 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 Q96MT0 163 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 MCRIP2Q9BUT9 160 aaKnown RBP13.01□□□□□ -0.33
VARS-216ENST00000428445 DCLRE1BQ9H816 532 aa13.01□□□□□ -0.33
VARS-216ENST00000428445 NCBP2LA6PVI3 153 aaKnown RBP13□□□□□ -0.33
VARS-216ENST00000428445 NPIPB11E5RHQ5 1161 aa13□□□□□ -0.33
VARS-216ENST00000428445 MAGEB3O15480 346 aa13□□□□□ -0.33
VARS-216ENST00000428445 SULT1B1O43704 296 aa13□□□□□ -0.33
VARS-216ENST00000428445 FADS2O95864 444 aaKnown RBP13□□□□□ -0.33
VARS-216ENST00000428445 IL1AP01583 271 aa13□□□□□ -0.33
VARS-216ENST00000428445 ALDH3A2P51648 485 aa13□□□□□ -0.33
VARS-216ENST00000428445 ZIK1Q3SY52 487 aaPredicted RBP13□□□□□ -0.33
VARS-216ENST00000428445 EAF1Q96JC9 268 aaPredicted RBP13□□□□□ -0.33
VARS-216ENST00000428445 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
VARS-216ENST00000428445 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
VARS-216ENST00000428445 ZNF736B4DX44 427 aaPredicted RBP12.99□□□□□ -0.33
VARS-216ENST00000428445 GZMHP20718 246 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 RAB7AP51149 207 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 SLC35B1P78383 322 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 IL13RA2Q14627 380 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 OR8H3Q8N146 312 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 OR51A2Q8NGJ7 313 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 OR10X1Q8NGY0 326 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 OR5AK2Q8NH90 309 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 LGALS12Q96DT0 336 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 PDCD1LG2Q9BQ51 273 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 U3KQK5 164 aa12.99□□□□□ -0.33
VARS-216ENST00000428445 IGHV3-43A0A0B4J1X8 118 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 IGHV1-3A0A0C4DH29 117 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 GABRPO00591 440 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 HSD17B6O14756 317 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 FGF16O43320 207 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 ZFPL1O95159 310 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 HTR3BO95264 441 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 IGHV3-43DP0DP04 118 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 ECI1P42126 302 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 GBX2P52951 348 aaPredicted RBP12.98□□□□□ -0.33
VARS-216ENST00000428445 RAB40BQ12829 278 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 ZFP1Q6P2D0 407 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 FOXRED2Q8IWF2 684 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 COMMD1Q8N668 190 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 Q8N9W7 124 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 CCDC107Q8WV48 283 aa12.98□□□□□ -0.33
VARS-216ENST00000428445 TNFAIP8L1Q8WVP5 186 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 361.1 ms