RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 RPUSD4Q96CM3 377 aaKnown RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 SIGLEC12Q96PQ1 595 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 HSPB9Q9BQS6 159 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 PARLQ9H300 379 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 CEP350Q5VT06 3117 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 A0A0U1RQV5 110 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 IGHEP01854 428 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 OPN1LWP04000 364 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 C8AP07357 584 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 PPP1CBP62140 327 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 FBLN7Q53RD9 439 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 FAM3CQ92520 227 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 PINX1Q96BK5 328 aaKnown RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 FAM71F1Q96KD3 344 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 Q96M66 194 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 RNF2Q99496 336 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 CSTL1Q9H114 145 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 IGHV2OR16-5A0A0B4J2B6 119 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 A0A0U1RQK1 487 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 ZNF320A2RRD8 509 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 CBY3A6NI87 242 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 NPIPB13A6NJU9 1138 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 NPIPB4C9JG80 1138 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 MPPED1O15442 326 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 PIAS2O75928 621 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 TIAF1O95411 115 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 GP1BBP13224 206 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 BMP5P22003 454 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 YPEL3P61236 119 aaPredicted RBP13.89□□□□□ -0.19
C9orf3-206ENST00000428313 ZNF695Q8IW36 515 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 OR4C5Q8NGB2 326 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 OR5AU1Q8NGC0 362 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 VPS25Q9BRG1 176 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 VSIRQ9H7M9 311 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 PPIAL4AQ9Y536 164 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 KIAA2026Q5HYC2 2103 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 IGKV1D-43A0A0B4J1Z2 117 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 A6NCN8 305 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 PRRT4C9JH25 899 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 NPIPA5E9PKD4 350 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 HS3ST1O14792 307 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 TRAPPC6AO75865 159 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 OR2J2O76002 312 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 HNRNPA3P51991 378 aaKnown RBP13.89□□□□□ -0.19
C9orf3-206ENST00000428313 ZP4Q12836 540 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 FOXL1Q12952 345 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 MSMO1Q15800 293 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 SELENOHQ8IZQ5 122 aaKnown RBP13.89□□□□□ -0.19
C9orf3-206ENST00000428313 PLPPR1Q8TBJ4 325 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 ELSPBP1Q96BH3 223 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 NPIPA1Q9UND3 350 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 ST3GAL6Q9Y274 331 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 VDAC3Q9Y277 283 aa13.89□□□□□ -0.19
C9orf3-206ENST00000428313 TRAV30A0A087WSZ9 112 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 TMED7-TICAM2A0A0A6YYA0 188 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 BLACEA4D250 179 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 ADAM20O43506 726 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 ADH5P11766 374 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 HLA-DOBP13765 273 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 CD33P20138 364 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 PSMB3P49720 205 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 PAX9P55771 341 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 SHBQ15464 509 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 MAJINQ3KP22 176 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 FAM78BQ5VT40 261 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 C1orf174Q8IYL3 243 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 OR5T1Q8NG75 326 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 MRPL30Q8TCC3 161 aaKnown RBP13.88□□□□□ -0.19
C9orf3-206ENST00000428313 ANKUB1A6NFN9 424 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 CCDC85CA6NKD9 419 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 TMEM238C9JI98 176 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 TNFRSF10CO14798 259 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 CHST1O43916 411 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 CLPSP04118 112 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 IGLC2P0DOY2 106 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 IGLC3P0DOY3 106 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 PGCP20142 388 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 BLKP51451 505 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 HERV-K104P61576 105 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 NMSQ5H8A3 153 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 ZNF709Q8N972 641 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 RSG1Q9BU20 258 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 APOOQ9BUR5 198 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 TP53TG3Q9ULZ0 132 aa13.88□□□□□ -0.19
C9orf3-206ENST00000428313 ADMP35318 185 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 ZNF121P58317 390 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 LINC00310P59036 64 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 SUMO1P63165 101 aaKnown RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 RPL19P84098 196 aaKnown RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 SPATA45Q537H7 98 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 BAHD1Q8TBE0 780 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 APH1AQ96BI3 265 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 ZBP1Q9H171 429 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 ZNF703Q9H7S9 590 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 RYDENQ9NUL5 291 aaKnown RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 TBX21Q9UL17 535 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 UBE2J1Q9Y385 318 aaPredicted RBP13.87□□□□□ -0.19
C9orf3-206ENST00000428313 WDR1O75083 606 aa13.87□□□□□ -0.19
C9orf3-206ENST00000428313 CNOT4O95628 575 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms