RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 RND3P61587 244 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 NAAAQ02083 359 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 BAP18Q8IXM2 172 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 GAPTQ8N292 157 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 GTF3C1Q12789 2109 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 INTS1Q8N201 2190 aaKnown RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 IGHV2OR16-5A0A0B4J2B6 119 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR5H1A6NKK0 313 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 CRYABP02511 175 aaKnown RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 MBPP02686 304 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM268Q5VZI3 342 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 ASCL5Q7RTU5 278 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 HSD17B13Q7Z5P4 300 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 SLC35G3Q8N808 338 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 GALNT11Q8NCW6 608 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 PLPPR1Q8TBJ4 325 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 BCL2L14Q9BZR8 327 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 PCDHB10Q9UN67 800 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 AMDHD2Q9Y303 409 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 UBE2J1Q9Y385 318 aaPredicted RBP11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 FAM215AQ9Y5M1 114 aa11.87□□□□□ -0.51
APOBEC3D-202ENST00000427494 K7EPK0 472 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 SH2D1BO14796 132 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 FGF2P09038 288 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZP3P21754 424 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 TUBG1P23258 451 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 RPL12P30050 165 aaKnown RBP11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 GCH1P30793 250 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 FABP6P51161 128 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 SRPXP78539 464 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF146Q15072 292 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 C1orf185Q5T7R7 199 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 PCSK4Q6UW60 755 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 RPRMLQ8N4K4 120 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 FAM71E2Q8N5Q1 922 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 KIRREL1Q96J84 757 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 LINC00052Q96N35 136 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM222Q9H0R3 208 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 CXXC4Q9H2H0 198 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 BARX1Q9HBU1 254 aaPredicted RBP11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR2S2Q9NQN1 319 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 TUBG2Q9NRH3 451 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 CCL28Q9NRJ3 127 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 TREM2Q9NZC2 230 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 FRYQ5TBA9 3013 aa11.86□□□□□ -0.51
APOBEC3D-202ENST00000427494 TRAV39A0A0B4J263 110 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 A8MXK9 166 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 LGALS8O00214 317 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 KITLGP21583 273 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF497Q6ZNH5 498 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 MOB1BQ7L9L4 216 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 SPERTQ8NA61 448 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 BVESQ8NE79 360 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR52M1Q8NGK5 317 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 IL1F10Q8WWZ1 152 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 GPHA2Q96T91 129 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZFHX2Q9C0A1 2572 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR14J1Q9UGF5 321 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMED3Q9Y3Q3 217 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 SLC25A15Q9Y619 301 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ASPMQ8IZT6 3477 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 TAAR5O14804 337 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 CRYZL1O95825 349 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 CEBPDP49716 269 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF324BQ6AW86 544 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF826PQ6ZT77 177 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF695Q8IW36 515 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 H1FOOQ8IZA3 346 aaPredicted RBP11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMED6Q8WW62 240 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 TRAPPC2LQ9UL33 140 aa11.85□□□□□ -0.51
APOBEC3D-202ENST00000427494 A6NLC8 198 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 E5RGE8 158 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 TNFSF12O43508 249 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 HAND1O96004 215 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 EIF2S3LQ2VIR3 472 aaKnown RBP11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 PRAMEF6Q5VXH4 476 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 SHEQ5VZ18 495 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 MBNL2Q5VZF2 373 aaKnown RBP11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 ALKBH2Q6NS38 261 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 ZNF474Q6S9Z5 364 aaPredicted RBP11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 Q6ZR03 302 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 C11orf53Q8IXP5 236 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 CMTM1Q8IZ96 169 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 PRR18Q8N4B5 295 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM56Q96MV1 263 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 NARFLQ9H6Q4 476 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 HES4Q9HCC6 221 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 MSL2Q9HCI7 577 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR1A1Q9P1Q5 309 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 WASF3Q9UPY6 502 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 NSG2Q9Y328 171 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 OR2W1Q9Y3N9 320 aa11.84□□□□□ -0.51
APOBEC3D-202ENST00000427494 TMEM56-RWDD3S4R434 201 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms