RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 C16orf95Q9H693 158 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 SSR3Q9UNL2 185 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 LINC00312Q9Y6C7 94 aa10.29□□□□□ -0.76
GPC1-204ENST00000426280 IGHV2-26A0A0B4J1V2 119 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 LOC100506127A0A0U1RQW1 187 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 A0A1W2PPH5 198 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 CLPXO76031 633 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 CD37P11049 281 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
GPC1-204ENST00000426280 TGFBR1P36897 503 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 MTNR1BP49286 362 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 DYNC1I2Q13409 638 aaKnown RBP10.28□□□□□ -0.76
GPC1-204ENST00000426280 ATXN7L3Q14CW9 347 aaPredicted RBP10.28□□□□□ -0.76
GPC1-204ENST00000426280 SSX2Q16385 188 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 LRRC75BQ2VPJ9 315 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 C1orf100Q5SVJ3 147 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 GLT8D1Q68CQ7 371 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 OR10K2Q6IF99 312 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 FAM53AQ6NSI3 398 aaPredicted RBP10.28□□□□□ -0.76
GPC1-204ENST00000426280 CDH26Q8IXH8 852 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 OR51T1Q8NGJ9 327 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 OR13A1Q8NGR1 328 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 CORO2AQ92828 525 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 S100A13Q99584 98 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 UQCC2Q9BRT2 126 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 CENPOQ9BU64 300 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 BANF2Q9H503 90 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 IL36GQ9NZH8 169 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 HILPDAQ9Y5L2 63 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 SESN1Q9Y6P5 492 aa10.28□□□□□ -0.76
GPC1-204ENST00000426280 ODAMA1E959 279 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 CSTBP04080 98 aaKnown RBP10.27□□□□□ -0.77
GPC1-204ENST00000426280 CLEC2LP0C7M8 214 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 GALP22466 123 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 MYL9P24844 172 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 CDK2P24941 298 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 HTR2CP28335 458 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 LGALS4P56470 323 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 CLDN12P56749 244 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 HABP2Q14520 560 aaPredicted RBP10.27□□□□□ -0.77
GPC1-204ENST00000426280 P2RY14Q15391 338 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 FAM189A2Q15884 450 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 KRBOX4Q5JUW0 171 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 HES5Q5TA89 166 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 DHRS7BQ6IAN0 325 aaPredicted RBP10.27□□□□□ -0.77
GPC1-204ENST00000426280 GDPGP1Q6ZNW5 385 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 TRAPPC6BQ86SZ2 158 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 NR2C2APQ86WQ0 139 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 TMEM219Q86XT9 240 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 OSR2Q8N2R0 312 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 TMEM104Q8NE00 496 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 OR4P4Q8NGL7 312 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 OR13D1Q8NGV5 346 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 FAM46BQ96A09 425 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 FOXRED1Q96CU9 486 aaPredicted RBP10.27□□□□□ -0.77
GPC1-204ENST00000426280 MRPS26Q9BYN8 205 aaKnown RBP10.27□□□□□ -0.77
GPC1-204ENST00000426280 TMEM133Q9H2Q1 129 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 PLGRKTQ9HBL7 147 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 ZNF286AQ9HBT8 521 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 KIF25Q9UIL4 384 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 ST3GAL6Q9Y274 331 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 NBEAL1Q6ZS30 2694 aa10.27□□□□□ -0.77
GPC1-204ENST00000426280 TRAV1-2A0A0B4J238 106 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 hCG_1809904A0A1W2PP81 198 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 A0A1W2PPE2 198 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 A0A1W2PR64 198 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 A0A1W2PRV1 198 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 A6NDX4 124 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 VGLL3A8MV65 326 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 GEMIN2O14893 280 aaKnown RBP10.26□□□□□ -0.77
GPC1-204ENST00000426280 SLC22A1O15245 554 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 IGHV3-7P01780 117 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 RBP4P02753 201 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 TFAP2AP05549 437 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 CD24P25063 80 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 RPL15P61313 204 aaKnown RBP10.26□□□□□ -0.77
GPC1-204ENST00000426280 LSM3P62310 102 aaKnown RBP10.26□□□□□ -0.77
GPC1-204ENST00000426280 MXD1Q05195 221 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 RSBN1Q5VWQ0 802 aaPredicted RBP10.26□□□□□ -0.77
GPC1-204ENST00000426280 C5orf24Q7Z6I8 188 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 OR13F1Q8NGS4 319 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 OR5R1Q8NH85 324 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 MALSU1Q96EH3 234 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 GLS2Q9UI32 602 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 UBE2J1Q9Y385 318 aaPredicted RBP10.26□□□□□ -0.77
GPC1-204ENST00000426280 V9GY05 133 aa10.26□□□□□ -0.77
GPC1-204ENST00000426280 A0A0B4J203 849 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 A0A1B0GUS0 222 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 BTBD17A6NE02 478 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 SLC17A2O00624 439 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 AIREO43918 545 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
GPC1-204ENST00000426280 MPIG6BO95866 241 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 IGLV1-47P01700 117 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 CSN2P05814 226 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 VSIG8P0DPA2 414 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 GTF2F2P13984 249 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 MGMTP16455 207 aa10.25□□□□□ -0.77
GPC1-204ENST00000426280 RAB3BP20337 219 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms