RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 HERV-K104P61576 105 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 SUPT4H1P63272 117 aaKnown RBP12.13□□□□□ -0.47
CDK3-201ENST00000425876 HLA-DRB3P79483 266 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 PAX5Q02548 391 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 IGSF11Q5DX21 431 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 LY6G6FQ5SQ64 297 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 CLEC18BQ6UXF7 455 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 C20orf204Q6ZNR8 217 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 SLC38A6Q8IZM9 456 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 PLPPR1Q8TBJ4 325 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 Q8TCH9 128 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 ITLN1Q8WWA0 313 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 CABLES2Q9BTV7 478 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 TMPRSS13Q9BYE2 586 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 OR14J1Q9UGF5 321 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
CDK3-201ENST00000425876 FAM90A27PA6NNH2 459 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 NPIPB11E5RHQ5 1161 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 TUSC2O75896 110 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 PPYP01298 95 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 CD55P08174 381 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 OR4A8P0C604 315 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 PI3P19957 117 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 GMFBP60983 142 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 HERPUD1Q15011 391 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 OR11H4Q8NGC9 324 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 COQ8AQ8NI60 647 aa12.13□□□□□ -0.47
CDK3-201ENST00000425876 TMEM30CPA0ZSE6 113 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 CRYM-AS1A6NIL9 109 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 RFPL4AA6NLU0 287 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 SHISA9B4DS77 424 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 B8ZZF3 427 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 RFPL4AL1F8VTS6 287 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.12□□□□□ -0.47
CDK3-201ENST00000425876 PSPNO60542 156 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 SIX6O95475 246 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
CDK3-201ENST00000425876 AADACP22760 399 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 TNFAIP6P98066 277 aaPredicted RBP12.12□□□□□ -0.47
CDK3-201ENST00000425876 DCAF12L2Q5VW00 463 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 LAMTOR1Q6IAA8 161 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 MOGAT3Q86VF5 341 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 SGPP2Q8IWX5 399 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 C9orf62Q8N4C0 152 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 GCSAMQ8N6F7 178 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 LILRB1Q8NHL6 650 aaPredicted RBP12.12□□□□□ -0.47
CDK3-201ENST00000425876 CASTOR1Q8WTX7 329 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 RSRP1Q9BUV0 290 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 KCNJ16Q9NPI9 418 aa12.12□□□□□ -0.47
CDK3-201ENST00000425876 TRBV6-7A0A0A0MS04 114 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 IGKV1-6A0A0C4DH72 117 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 CD8AP01732 235 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 CD3EP07766 207 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 EGR1P18146 543 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 NFYAP23511 347 aaPredicted RBP12.11□□□□□ -0.47
CDK3-201ENST00000425876 PRDX2P32119 198 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 ADAM5Q6NVV9 412 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 DMRTC2Q8IXT2 367 aaPredicted RBP12.11□□□□□ -0.47
CDK3-201ENST00000425876 FAM185AQ8N0U4 392 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 CA5BP1Q8WTZ4 195 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 TOMM40LQ969M1 308 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 GALNT14Q96FL9 552 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 PLPPR2Q96GM1 343 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 GCM1Q9NP62 436 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 RAB18Q9NP72 206 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 RNF7Q9UBF6 113 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
CDK3-201ENST00000425876 NKX2-6A6NCS4 301 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 C17orf100A8MU93 164 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 BET1O15155 118 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 IFNA2P01563 188 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 PSG2P11465 335 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 TNFRSF1AP19438 455 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 SERPINF1P36955 418 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 OR3A1P47881 315 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 CEBPDP49716 269 aaPredicted RBP12.1□□□□□ -0.47
CDK3-201ENST00000425876 PIGPP57054 158 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 FXYD4P59646 89 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 COL10A1Q03692 680 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 ATXN7L3Q14CW9 347 aaPredicted RBP12.1□□□□□ -0.47
CDK3-201ENST00000425876 HMGN3Q15651 99 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 ABCA11PQ4W5N1 156 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 SPRNQ5BIV9 151 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 Q5BKY6 102 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 BEX5Q5H9J7 111 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 FAM209AQ5JX71 171 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 OR5T2Q8NGG2 359 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 FAM222BQ8WU58 562 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 KCNIP3Q9Y2W7 256 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 BOLA1Q9Y3E2 137 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 ZNF462Q96JM2 2506 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 COL6A6A6NMZ7 2263 aa12.1□□□□□ -0.47
CDK3-201ENST00000425876 CHD3Q12873 2000 aaKnown RBP12.1□□□□□ -0.47
CDK3-201ENST00000425876 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 HMSDA8MTL9 139 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 E7EQL1 145 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 RGS13O14921 159 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms