RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 RSU1Q15404 277 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SSX6Q7RTT6 188 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SATL1Q86VE3 508 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR51T1Q8NGJ9 327 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 COQ2Q96H96 371 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RAX2Q96IS3 184 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PRR25Q96S07 402 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MBOAT4Q96T53 435 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RIBC2Q9H4K1 309 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PAK1IP1Q9NWT1 392 aaPredicted RBP9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KIF25Q9UIL4 384 aa9.67□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TCRBV3S1A0A5B6 114 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 J3QLW9 94 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 HSD17B6O14756 317 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TXNL1O43396 289 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MOSP00540 346 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGHV3-7P01780 117 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LYL1P12980 280 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF19P17023 458 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CD1BP29016 333 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SOX6P35712 828 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GDNFP39905 211 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GPR12P47775 334 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF816Q0VGE8 651 aaPredicted RBP9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IL13RA2Q14627 380 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KISS1Q15726 138 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MEDAGQ5VYS4 303 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 Q6P435 159 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FDX2Q6P4F2 183 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF429Q86V71 674 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PXT1Q8NFP0 134 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR52M1Q8NGK5 317 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CNIH3Q8TBE1 160 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MRGPRDQ8TDS7 321 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 NEK7Q8TDX7 302 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 C4orf3Q8WVX3 66 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 EAF1Q96JC9 268 aaPredicted RBP9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 JAM3Q9BX67 310 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OSBPL10Q9BXB5 764 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 DHDHQ9UQ10 334 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 POMPQ9Y244 141 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MYRFQ9Y2G1 1151 aa9.66□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGHV1-3A0A0C4DH29 117 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGKV1-12A0A0C4DH73 117 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 A0A1W2PPI3 338 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 M0R129 80 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SULT1B1O43704 296 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 MITFO75030 526 aaPredicted RBP9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 IGKV1D-12P01611 117 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 CD2P06729 351 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 T-ENOLP0DO92 83 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RAB3AP20336 220 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 RASSF2P50749 326 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 GYS2P54840 703 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ALKBH1Q13686 389 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 EBI3Q14213 229 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ZNF691Q5VV52 312 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 KDM4DQ6B0I6 523 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ELP2Q6IA86 826 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ACBD7Q8N6N7 88 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR11H1Q8NG94 326 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 OR13A1Q8NGR1 328 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 ARL11Q969Q4 196 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 SPACA5Q96QH8 159 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 PPIL3Q9H2H8 161 aaKnown RBP9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 LINC00574Q9H8X3 128 aa9.65□□□□□ -0.86
HLA-DQB3-203ENST00000425319 TMEM30CPA0ZSE6 113 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 NPIPB11E5RHQ5 1161 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SDCBPO00560 298 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SLC16A6O15403 523 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 HTR3BO95264 441 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CGB3P0DN86 165 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 CGB7P0DN87 165 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 KIR3DL2P43630 455 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LUMP51884 338 aaPredicted RBP9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ZNF85Q03923 595 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ATP6AP1Q15904 470 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 Q3ZCU0 254 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 IZUMO1Q8IYV9 350 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR1N2Q8NGR9 330 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 OR5AK2Q8NH90 309 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TNFAIP8L1Q8WVP5 186 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 LEAP2Q969E1 77 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 EME1Q96AY2 570 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 RNFT2Q96EX2 444 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 FAM192AQ9GZU8 254 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 METTL9Q9H1A3 318 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 ING4Q9UNL4 249 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 AP4S1Q9Y587 144 aa9.64□□□□□ -0.87
HLA-DQB3-203ENST00000425319 IGHV3-72A0A0B4J1Y9 119 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 TMEM212A6NML5 194 aa9.63□□□□□ -0.87
HLA-DQB3-203ENST00000425319 SPINT2O43291 252 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms