RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 MOB3AQ96BX8 217 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SAT2Q96F10 170 aaPredicted RBP9.16□□□□□ -0.94
CUX1-205ENST00000425244 HS3ST6Q96QI5 342 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 GPHA2Q96T91 129 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SYT3Q9BQG1 590 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 C1QTNF5Q9BXJ0 243 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 ZNF71Q9NQZ8 489 aaPredicted RBP9.16□□□□□ -0.94
CUX1-205ENST00000425244 IL36GQ9NZH8 169 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 PLA2G2EQ9NZK7 142 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 IL36RNQ9UBH0 155 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 SPTA1P02549 2419 aa9.16□□□□□ -0.94
CUX1-205ENST00000425244 TLN1Q9Y490 2541 aaKnown RBP9.15□□□□□ -0.94
CUX1-205ENST00000425244 TRAV17A0A0B4J275 112 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 E5RGE8 158 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 RNASEK-C17orf49H0YIS7 233 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 PVALBP20472 110 aaPredicted RBP9.15□□□□□ -0.94
CUX1-205ENST00000425244 ASCL1P50553 236 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 ZNF616Q08AN1 781 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 TMEM268Q5VZI3 342 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 SLC16A13Q7RTY0 426 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 LGI3Q8N145 548 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 GLYATL2Q8WU03 294 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 SECTM1Q8WVN6 248 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 NRIP2Q9BQI9 281 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 SUCNR1Q9BXA5 334 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 NSG2Q9Y328 171 aa9.15□□□□□ -0.94
CUX1-205ENST00000425244 TRGV5A0A0B4J1U4 118 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 MED19A0JLT2 244 aaPredicted RBP9.15□□□□□ -0.95
CUX1-205ENST00000425244 ZNF503-AS2A6NEH8 195 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 PPYP01298 95 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 OR8U9P0C7N5 309 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 NFYBP25208 207 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 SULT1A2P50226 295 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 FAM76BQ5HYJ3 339 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 OR8U1Q8NH10 309 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 SFT2D1Q8WV19 159 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 GALNT14Q96FL9 552 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 TP53RKQ96S44 253 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 PRDM14Q9GZV8 571 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 NIT2Q9NQR4 276 aa9.15□□□□□ -0.95
CUX1-205ENST00000425244 A0A1B0GV50 99 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 C3orf80F5H4A9 247 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 SLC33A1O00400 549 aaPredicted RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 NGFP01138 241 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 CLDN18P56856 261 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 HFEQ30201 348 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 TMEM211Q6ICI0 200 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 SLC35G3Q8N808 338 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 CCDC71LQ8N9Z2 235 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 TMEM45BQ96B21 275 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 MSI2Q96DH6 328 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 ABHD17AQ96GS6 310 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 TECTBQ96PL2 329 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 PLEKHA2Q9HB19 425 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 RCC2Q9P258 522 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 MIOXQ9UGB7 285 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 CARHSP1Q9Y2V2 147 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 MRPS18CQ9Y3D5 142 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 ZNF732B4DXR9 585 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 H7C1Q1 480 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 KALRNO60229 2985 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 GAPDHP04406 335 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 DAZAP2Q15038 168 aaPredicted RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 DMRTC2Q8IXT2 367 aaPredicted RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 ZDHHC23Q8IYP9 409 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 HSD17B11Q8NBQ5 300 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 SPSB4Q96A44 273 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 C18orf12Q96KH6 178 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 SEC11CQ9BY50 192 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 FGF23Q9GZV9 251 aaPredicted RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 WFDC1Q9HC57 220 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 RYDENQ9NUL5 291 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 SPRR3Q9UBC9 169 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 RCL1Q9Y2P8 373 aaKnown RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 UBE2J1Q9Y385 318 aaPredicted RBP9.14□□□□□ -0.95
CUX1-205ENST00000425244 ATRXP46100 2492 aa9.14□□□□□ -0.95
CUX1-205ENST00000425244 ADGRG4Q8IZF6 3080 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 C9JQL5 133 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 ST8SIA3O43173 380 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 C1QL1O75973 258 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 PRH1P02810 166 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 SCTP09683 121 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 PCP4P48539 62 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 FHITP49789 147 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 F2RL1P55085 397 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 NHLH2Q02577 135 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 C16orf54Q6UWD8 224 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 IGFL2Q6UWQ7 119 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 APH1AQ96BI3 265 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 ZNF488Q96MN9 340 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 REPIN1Q9BWE0 567 aaKnown RBP9.13□□□□□ -0.95
CUX1-205ENST00000425244 C12orf49Q9H741 205 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 UFSP2Q9NUQ7 469 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 ITPR1Q14643 2758 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 IGKV3D-15A0A087WSY6 115 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 BORCS7-ASMTA0A0B4J1R7 106 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 C3orf85A0A1B0GTC6 90 aa9.13□□□□□ -0.95
CUX1-205ENST00000425244 NKX2-6A6NCS4 301 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms