RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 RNASEH2CQ8TDP1 164 aaKnown RBP11.05□□□□□ -0.64
TOP2B-203ENST00000424225 NDUFAF3Q9BU61 184 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 CBLN4Q9NTU7 201 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 FREM1Q5H8C1 2179 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 CEACAM1P13688 526 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 CRYGSP22914 178 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 PPM1FP49593 454 aaPredicted RBP11.05□□□□□ -0.64
TOP2B-203ENST00000424225 ERVS71-1P61550 626 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 DDA1Q9BW61 102 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 ZNF160Q9HCG1 818 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 RELNP78509 3460 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 TRBV24-1A0A075B6N3 115 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 ELOA3CA0A087WX78 387 aaPredicted RBP11.05□□□□□ -0.64
TOP2B-203ENST00000424225 A0A0U1RQV5 110 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 HMGB3O15347 200 aaKnown RBP11.05□□□□□ -0.64
TOP2B-203ENST00000424225 NPSP0C0P6 89 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 HOXA6P31267 233 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 ESPL1Q14674 2120 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 LGI3Q8N145 548 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 OR14L1PQ8NHC6 308 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 HIST1H2AAQ96QV6 131 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 PYGO2Q9BRQ0 406 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 ACTR3CQ9C0K3 210 aaPredicted RBP11.05□□□□□ -0.64
TOP2B-203ENST00000424225 RBKSQ9H477 322 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 CLEC1BQ9P126 229 aa11.05□□□□□ -0.64
TOP2B-203ENST00000424225 SLC25A53Q5H9E4 307 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 DNLZQ5SXM8 178 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 LCN15Q6UWW0 184 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 THNSL2Q86YJ6 484 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 DDIT4LQ96D03 193 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 NIPSNAP3BQ9BS92 247 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 GPR87Q9BY21 358 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 CDS2O95674 445 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 HLA-DQA1Q5Y7H0 255 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 RTL6Q6ICC9 239 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 FAM53AQ6NSI3 398 aaPredicted RBP11.04□□□□□ -0.64
TOP2B-203ENST00000424225 TMPRSS7Q7RTY8 843 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 OR13D1Q8NGV5 346 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 SIRT7Q9NRC8 400 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 TMEM256Q8N2U0 113 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 LFNGQ8NES3 379 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
TOP2B-203ENST00000424225 POLR3KQ9Y2Y1 108 aaPredicted RBP11.04□□□□□ -0.64
TOP2B-203ENST00000424225 SLC22A20A6NK97 555 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 FRMD6-AS1P0C7T7 363 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 NKX2-1P43699 371 aaPredicted RBP11.03□□□□□ -0.64
TOP2B-203ENST00000424225 NUBP1P53384 320 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 C17orf67Q0P5P2 114 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 ABCA11PQ4W5N1 156 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 FOXL2NBQ6ZUU3 175 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 C16orf82Q7Z2V1 217 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CENPVQ7Z7K6 275 aaPredicted RBP11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CMTM1Q8IZ96 169 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 OR51G1Q8NGK1 321 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 OR1P1Q8NH06 330 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 RASL10BQ96S79 203 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 PCGF1Q9BSM1 259 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 PROK2Q9HC23 129 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CCL28Q9NRJ3 127 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CLEC18AA5D8T8 446 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CYB5R3P00387 301 aaPredicted RBP11.03□□□□□ -0.64
TOP2B-203ENST00000424225 PDLIM4P50479 330 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 ZNF774Q6NX45 483 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 ANKRD37Q7Z713 158 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 ZDHHC23Q8IYP9 409 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 CLEC18CQ8NCF0 446 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 OR2M3Q8NG83 312 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 NKX2-4Q9H2Z4 354 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 SMDT1Q9H4I9 107 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 C8orf33Q9H7E9 229 aaPredicted RBP11.03□□□□□ -0.64
TOP2B-203ENST00000424225 PLEKHF2Q9H8W4 249 aa11.03□□□□□ -0.64
TOP2B-203ENST00000424225 A0A087WZY1 265 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 VSTM2BA6NLU5 285 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 RNPS1Q15287 305 aaKnown RBP11.02□□□□□ -0.64
TOP2B-203ENST00000424225 OR8G5Q8NG78 346 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 OR1K1Q8NGR3 316 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 LMX1AQ8TE12 382 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 ST3GAL6Q9Y274 331 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 CABIN1Q9Y6J0 2220 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 DOCK11Q5JSL3 2073 aa11.02□□□□□ -0.64
TOP2B-203ENST00000424225 PRAMEF20Q5VT98 475 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 ZNF501Q96CX3 271 aaPredicted RBP11.02□□□□□ -0.65
TOP2B-203ENST00000424225 RBM14Q96PK6 669 aaKnown RBP11.02□□□□□ -0.65
TOP2B-203ENST00000424225 LRRC3CA6NJW4 275 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 AQP7P3A6NL99 342 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 M0R135 149 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 SYNGR3O43761 229 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 CYTIPO60759 359 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 LILRA1O75019 489 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 DTYMKP23919 212 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 TAS2R30P59541 319 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 ZNF92Q03936 586 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 HYAL1Q12794 435 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 C21orf62-AS1Q17RA5 79 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 COA6Q5JTJ3 125 aaKnown RBP11.02□□□□□ -0.65
TOP2B-203ENST00000424225 PCSK4Q6UW60 755 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 RPP25LQ8N5L8 163 aaKnown RBP11.02□□□□□ -0.65
TOP2B-203ENST00000424225 RAB24Q969Q5 203 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 ZNF799Q96GE5 643 aa11.02□□□□□ -0.65
TOP2B-203ENST00000424225 PRDM6Q9NQX0 595 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms