RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 CA11O75493 328 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 HIST1H1DP16402 221 aaKnown RBP13.99□□□□□ -0.17
COL7A1-202ENST00000422991 PAX8Q06710 450 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 Q6ZTK2 550 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 GAPTQ8N292 157 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 CMTM3Q96MX0 182 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 DCUN1D5Q9BTE7 237 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 TMPRSS13Q9BYE2 586 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 YAE1D1Q9NRH1 226 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 ONECUT1Q9UBC0 465 aa13.99□□□□□ -0.17
COL7A1-202ENST00000422991 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 MEIKINA0A087WXM9 373 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 A0A0A6YYH2 397 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 MEX3AA1L020 520 aaKnown RBP13.98□□□□□ -0.17
COL7A1-202ENST00000422991 A6NJ64 397 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 EIF4EP06730 217 aaKnown RBP13.98□□□□□ -0.17
COL7A1-202ENST00000422991 HOXB4P17483 251 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-202ENST00000422991 DLX6P56179 175 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 FAHD2BQ6P2I3 314 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-202ENST00000422991 CORO2AQ92828 525 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 FAHD2AQ96GK7 314 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 SIRPDQ9H106 197 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 OR6C3Q9NZP0 311 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 OPN4Q9UHM6 478 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 AK3Q9UIJ7 227 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 KCNK7Q9Y2U2 307 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 UBE2J1Q9Y385 318 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-202ENST00000422991 KPTNQ9Y664 436 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 MXRA5Q9NR99 2828 aa13.98□□□□□ -0.17
COL7A1-202ENST00000422991 KIAA2026Q5HYC2 2103 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 A0A075B6Q4 140 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 TRGV10A0A0A0MS01 117 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 A0A1W2PPH5 198 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 A8MV72 311 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-202ENST00000422991 M0R1W7 72 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 HPGDSO60760 199 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 APOA1P02647 267 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 MT-ND4P03905 459 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 MMP9P14780 707 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 GNB3P16520 340 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 CCL3L1P16619 93 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 CDK2P24941 298 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 GLP1RP43220 463 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 ARF6P62330 175 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 OLFML2AQ68BL7 652 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 TRAPPC6BQ86SZ2 158 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 OR13A1Q8NGR1 328 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 MRPL30Q8TCC3 161 aaKnown RBP13.97□□□□□ -0.17
COL7A1-202ENST00000422991 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
COL7A1-202ENST00000422991 C7orf69Q9H7B7 122 aa13.97□□□□□ -0.17
COL7A1-202ENST00000422991 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.97□□□□□ -0.17
COL7A1-202ENST00000422991 SERPINE3A8MV23 424 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 NAPSAO96009 420 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 ZNF728P0DKX0 622 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 ELK1P19419 428 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 ARL6IP1Q15041 203 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 CR1LQ2VPA4 569 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 KRTAP21-3Q3LHN1 58 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 METTL11BQ5VVY1 283 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 Q8N7P7 452 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 PHF21AQ96BD5 680 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 S100A16Q96FQ6 103 aaKnown RBP13.96□□□□□ -0.17
COL7A1-202ENST00000422991 ZNF714Q96N38 554 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 WDFY2Q96P53 400 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 ZMAT3Q9HA38 289 aaKnown RBP13.96□□□□□ -0.17
COL7A1-202ENST00000422991 DIABLOQ9NR28 239 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 BATF3Q9NR55 127 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 TAS2R3Q9NYW6 316 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 AUP1Q9Y679 476 aa13.96□□□□□ -0.17
COL7A1-202ENST00000422991 SVEP1Q4LDE5 3571 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 TRAV39A0A0B4J263 110 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 C17orf98A8MV24 154 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 XRCC3O43542 346 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 AVPP01185 164 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 RBP4P02753 201 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 GSTP1P09211 210 aaKnown RBP13.95□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF260Q3ZCT1 412 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 CDNFQ49AH0 187 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 Q6ZPA2 131 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 C1orf229Q6ZS94 237 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-202ENST00000422991 C1orf122Q6ZSJ8 110 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 C11orf42Q8N5U0 333 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 OR4K15Q8NH41 348 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 MCFD2Q8NI22 146 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 MRGPRDQ8TDS7 321 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 CCDC107Q8WV48 283 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 TBX15Q96SF7 602 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 HDHD3Q9BSH5 251 aaPredicted RBP13.95□□□□□ -0.18
COL7A1-202ENST00000422991 MIXL1Q9H2W2 232 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 GAL3ST2Q9H3Q3 398 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 C12orf4Q9NQ89 552 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 TMEM160Q9NX00 188 aa13.95□□□□□ -0.18
COL7A1-202ENST00000422991 ANK3Q12955 4377 aaKnown RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 NAV3Q8IVL0 2385 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 TRAV18A0A075B6X5 111 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 TRBV6-6A0A0A6YYG2 114 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 TMEM235A6NFC5 223 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 ZNF729A6NN14 1252 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CTDSP2O14595 271 aa13.94□□□□□ -0.18
COL7A1-202ENST00000422991 CLPXO76031 633 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms