RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 FAM90A9PA6NNJ1 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A12PA8MX19 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A5PA8MXJ8 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 NPIPB11E5RHQ5 1161 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 J3QR06 171 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 DUS4LO95620 317 aaKnown RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 SNRNP70P08621 437 aaKnown RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A15PP0C7V4 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A13PP0C7W8 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A14PP0C7W9 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM90A24PP0C7X0 464 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 RAB7AP51149 207 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 RBM11P57052 281 aaKnown RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 PIGYQ3MUY2 71 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 C9orf152Q5JTZ5 239 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 UTF1Q5T230 341 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FOXB2Q5VYV0 432 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 ASCL4Q6XD76 172 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 TMPRSS11AQ6ZMR5 421 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 LINC00596Q86U02 117 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 SATL1Q86VE3 508 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 OR8H3Q8N146 312 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 OR10K1Q8NGX5 313 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 OR56B4Q8NH76 319 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 PLPPR1Q8TBJ4 325 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 MRGPRDQ8TDS7 321 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 TMEM106AQ96A25 262 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 RCC1LQ96I51 464 aaKnown RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 RDH12Q96NR8 316 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 SLC29A1Q99808 456 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 DPCDQ9BVM2 203 aaPredicted RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 IFT22Q9H7X7 185 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 S100A14Q9HCY8 104 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FGF20Q9NP95 211 aaPredicted RBP9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 TMEM138Q9NPI0 162 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 FAM118AQ9NWS6 357 aa9.19□□□□□ -0.94
SQSTM1-203ENST00000422245 TMEM30CPA0ZSE6 113 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 PSMB11A5LHX3 300 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 SH2D7A6NKC9 451 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 FGF16O43320 207 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 OR7C1O76099 320 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 HTR3BO95264 441 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 IGLL1P15814 213 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 TMEM11P17152 192 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 DCKP27707 260 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 SSTR5P35346 364 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 GTF2A1P52655 376 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 DDI2Q5TDH0 399 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 DRAM1Q8N682 238 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 SUMF2Q8NBJ7 301 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 ZNF555Q8NEP9 628 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 OR10X1Q8NGY0 326 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 LEAP2Q969E1 77 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 METTL9Q9H1A3 318 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 PAK1IP1Q9NWT1 392 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 SMPD3Q9NY59 655 aaPredicted RBP9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 PSG11Q9UQ72 335 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 ST3GAL6Q9Y274 331 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 ZNF281Q9Y2X9 895 aa9.18□□□□□ -0.94
SQSTM1-203ENST00000422245 HSD17B6O14756 317 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 ZNF780AO75290 641 aaPredicted RBP9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 WBP4O75554 376 aaKnown RBP9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 CSTBP04080 98 aaKnown RBP9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 MYL12AP19105 171 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 BDKRB2P30411 391 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 ZNF93P35789 620 aaPredicted RBP9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 GNG10P50151 68 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 RIPK1Q13546 671 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 HES1Q14469 280 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 LTC4SQ16873 150 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 MPV17LQ2QL34 196 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 XAF1Q6GPH4 301 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 C10orf99Q6UWK7 81 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 C5orf56Q8N8D9 126 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 OR51D1Q8NGF3 324 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 OR52N1Q8NH53 320 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 RFESDQ8TAC1 157 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 CHPT1Q8WUD6 406 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 SMIM19Q96E16 107 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 S100A13Q99584 98 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 GPR61Q9BZJ8 451 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 CKLFQ9UBR5 152 aa9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 EXOSC1Q9Y3B2 195 aaKnown RBP9.17□□□□□ -0.94
SQSTM1-203ENST00000422245 DNAH3Q8TD57 4116 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 CDRT1O95170 752 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 IGKV1D-33P01593 117 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 IGKV1-33P01594 117 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 GZMHP20718 246 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 SERPINA2P20848 420 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 SLC6A1P30531 599 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 ETV1P50549 477 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 RPL23AP62750 156 aaKnown RBP9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 ZNF816Q0VGE8 651 aaPredicted RBP9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 MED21Q13503 144 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 SMN1Q16637 294 aaKnown RBP9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 OR2G6Q5TZ20 316 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 IZUMO1Q8IYV9 350 aa9.16□□□□□ -0.94
SQSTM1-203ENST00000422245 C8orf31Q8N9H6 132 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms