RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 GAR1Q9NY12 217 aaKnown RBP9.33□□□□□ -0.92
PTCH1-206ENST00000421141 SNRPGP15A8MWD9 76 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 OGG1O15527 345 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 APH1BQ8WW43 257 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 C2orf50Q96LR7 162 aa9.33□□□□□ -0.92
PTCH1-206ENST00000421141 C3orf85A0A1B0GTC6 90 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 CPN1P15169 458 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 FAAP20Q6NZ36 180 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 AUNIPQ9H7T9 357 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF708P17019 499 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 NBL1P41271 181 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 CRYBB2P43320 205 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 SUCLG1P53597 346 aaKnown RBP9.32□□□□□ -0.92
PTCH1-206ENST00000421141 HLA-DRB3P79483 266 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 LYSMD2Q8IV50 215 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR4A4PQ8NGN8 299 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 GPX7Q96SL4 187 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-206ENST00000421141 SLC52A3Q9NQ40 469 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 AK3Q9UIJ7 227 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 UBE2L5PA0A1B0GUS4 154 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 GIPP09681 153 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR4F17Q8NGA8 305 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR4F5Q8NH21 305 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR4F4Q96R69 305 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 A0A0G2JMM0 328 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 A0A1W2PPB8 328 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 A0A1W2PRS3 328 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF320A2RRD8 509 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 KIR3DP1A8MWS1 328 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF788Q6ZQV5 615 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 BIN3Q9NQY0 253 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 BDP1A6H8Y1 2624 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 ZIC3O60481 467 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 IGHA1P01876 353 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 SMIM18P0DKX4 95 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 S100A11P31949 105 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 CD200P41217 278 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 TAGLNQ01995 201 aaKnown RBP9.32□□□□□ -0.92
PTCH1-206ENST00000421141 FADS6Q8N9I5 356 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 PRSS27Q9BQR3 290 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 GPR27Q9NS67 375 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 IL19Q9UHD0 177 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 LEUTXA8MZ59 168 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 PTP4A3O75365 173 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 OR2F2O95006 317 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 CELA3AP09093 270 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 FBP1P09467 338 aa9.32□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF552Q9H707 407 aaPredicted RBP9.32□□□□□ -0.92
PTCH1-206ENST00000421141 H2AFB1P0C5Y9 115 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 OR5I1Q13606 314 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 C8orf82Q6P1X6 216 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 TMEM54Q969K7 222 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 RHOFQ9HBH0 211 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 LSM2Q9Y333 95 aaKnown RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 GOLGB1Q14789 3259 aaKnown RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 GAPDHP04406 335 aaKnown RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 CD40P25942 277 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 FAM27E3Q08E93 113 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 MMDQ15546 238 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 ECSCRQ19T08 205 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 VWA1Q6PCB0 445 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 ABHD14AQ9BUJ0 271 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 MAGT1Q9H0U3 335 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 HILPDAQ9Y5L2 63 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 LIPFP07098 398 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 OR2B8PP59922 312 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 PAX6P26367 422 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 WDYHV1Q96HA8 205 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 AP1S3Q96PC3 154 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 GNG7O60262 68 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 RPL12P30050 165 aaKnown RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 FUT5Q11128 374 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 OR2F1Q13607 317 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 NCR3LG1Q68D85 454 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 ZFHX2Q9C0A1 2572 aaPredicted RBP9.31□□□□□ -0.92
PTCH1-206ENST00000421141 J3QW42 95 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 LIMS1P48059 325 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 RAB5BP61020 215 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 ACOT7LQ6ZUV0 252 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 SLC51BQ86UW2 128 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 ZBTB34Q8NCN2 500 aa9.31□□□□□ -0.92
PTCH1-206ENST00000421141 HAX1O00165 279 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 TXNDC12O95881 172 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 UBE2KP61086 200 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 TEX30Q5JUR7 227 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 DMKNQ6E0U4 476 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-206ENST00000421141 RAB40CQ96S21 281 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 GON7Q9BXV9 100 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 DSPPQ9NZW4 1301 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 PPIAL4CA0A0B4J2A2 164 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 ERVH48-1M5A8F1 160 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 MGST3O14880 152 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 PPIAL4GP0DN37 164 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 PF4V1P10720 104 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 GLCCI1Q86VQ1 547 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 POM121Q96HA1 1249 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 CHRDL1Q9BU40 450 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 NAA60Q9H7X0 242 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 CYB5R3P00387 301 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms