RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 OCSTAMPQ9BR26 566 aa10.33□□□□□ -0.76
TMEM53-206ENST00000420706 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
TMEM53-206ENST00000420706 SCPEP1Q9HB40 452 aa10.33□□□□□ -0.76
TMEM53-206ENST00000420706 CHMP1AQ9HD42 196 aaPredicted RBP10.33□□□□□ -0.76
TMEM53-206ENST00000420706 PRRC2AP48634 2157 aaKnown RBP10.33□□□□□ -0.76
TMEM53-206ENST00000420706 APCP25054 2843 aa10.33□□□□□ -0.76
TMEM53-206ENST00000420706 TRAV39A0A0B4J263 110 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 MEIS3P1A6NDR6 274 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 KIAA1324LA8MWY0 1029 aaPredicted RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 A8MXK9 166 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 GSTZ1O43708 216 aaPredicted RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 ECDO95905 644 aaPredicted RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 HEXAP06865 529 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 FCGR3AP08637 254 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 CGB3P0DN86 165 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 CGB7P0DN87 165 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 DTYMKP23919 212 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 CBX5P45973 191 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 DGCR2P98153 550 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 MEF2CQ06413 473 aaPredicted RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 ZNF846Q147U1 533 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 CR1LQ2VPA4 569 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 RNASE12Q5GAN4 147 aaKnown RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 TRAPPC6BQ86SZ2 158 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 GDPD1Q8N9F7 314 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 OR13A1Q8NGR1 328 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 FCAMRQ8WWV6 532 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 CORO2AQ92828 525 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 C1orf159Q96HA4 380 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 TSC22D3Q99576 134 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 Q9N2K0 584 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 C19orf12Q9NSK7 152 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 MBNL3Q9NUK0 354 aaKnown RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 ZNF230Q9UIE0 474 aaPredicted RBP10.32□□□□□ -0.76
TMEM53-206ENST00000420706 TRAPPC2LQ9UL33 140 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 ABCA12Q86UK0 2595 aa10.32□□□□□ -0.76
TMEM53-206ENST00000420706 LOC105371242A0A075B767 164 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 TRBV23-1A0A0A0MS06 115 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 C22orf46C9J442 243 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 FOXH1O75593 365 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 RBBP9O75884 186 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 LPLP06858 475 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 RCC1P18754 421 aaPredicted RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 CD40LGP29965 261 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 PPP5CP53041 499 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 RPL31P62899 125 aaKnown RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 SRSF7Q16629 238 aaKnown RBP eCLIP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 CD276Q5ZPR3 534 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 TMEM200BQ69YZ2 307 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 TCF23Q7RTU1 214 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 C5orf24Q7Z6I8 188 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 HOGA1Q86XE5 327 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 Q8N402 240 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 GVQW1Q8N7I0 195 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 LY6G5BQ8NDX9 201 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 SETD6Q8TBK2 473 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 SMIM4Q8WVI0 70 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 THAP7Q9BT49 309 aaPredicted RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 ST6GALNAC5Q9BVH7 336 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 WDR12Q9GZL7 423 aaKnown RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 OR6C3Q9NZP0 311 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 KLK11Q9UBX7 282 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 MTFP1Q9UDX5 166 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 RPUSD1Q9UJJ7 312 aaKnown RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 ANAPC10Q9UM13 185 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 POLR3KQ9Y2Y1 108 aaPredicted RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 POLQO75417 2590 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 ANKRD17O75179 2603 aaKnown RBP10.31□□□□□ -0.76
TMEM53-206ENST00000420706 MALRD1Q5VYJ5 2156 aa10.31□□□□□ -0.76
TMEM53-206ENST00000420706 DSCAML1Q8TD84 2053 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 PDZD2O15018 2839 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 YLPM1P49750 1951 aaKnown RBP10.3□□□□□ -0.76
TMEM53-206ENST00000420706 IGKV1D-8A0A087WSZ0 117 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 PPIAL4CA0A0B4J2A2 164 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 MEX3AA1L020 520 aaKnown RBP10.3□□□□□ -0.76
TMEM53-206ENST00000420706 LANCL1O43813 399 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 ORC5O43913 435 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 PPIAL4GP0DN37 164 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 NAT1P18440 290 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 GZMHP20718 246 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 LCN2P80188 198 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 PAX2Q02962 417 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 ZNF273Q14593 569 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 BAK1Q16611 211 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 C17orf58Q2M2W7 97 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 Q6ZS49 121 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 FAM185AQ8N0U4 392 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 ZNF565Q8N9K5 539 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 MAPK1IP1LQ8NDC0 245 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 MRGPRDQ8TDS7 321 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 MAFIPQ8WZ33 124 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 TAS2R3Q9NYW6 316 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 LPAR3Q9UBY5 353 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 MGAT4AQ9UM21 535 aa10.3□□□□□ -0.76
TMEM53-206ENST00000420706 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
TMEM53-206ENST00000420706 RBMX2Q9Y388 322 aaKnown RBP10.3□□□□□ -0.76
TMEM53-206ENST00000420706 LINC00312Q9Y6C7 94 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms