RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 ST6GALNAC5Q9BVH7 336 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 LINC00574Q9H8X3 128 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF286AQ9HBT8 521 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 DCAF16Q9NXF7 216 aa11.88□□□□□ -0.51
SHMT1P1-201ENST00000419974 FAM240BA0A1B0GVZ2 78 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 NKX6-3A6NJ46 265 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRDCB7Z8K6 153 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 GZMHP20718 246 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 GIFP27352 417 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 MECP2P51608 486 aaKnown RBP11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 SFRP4Q6FHJ7 346 aaPredicted RBP11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 CENPSQ8N2Z9 138 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 PLPPR1Q8TBJ4 325 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 FAM216AQ8WUB2 273 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 CORO2AQ92828 525 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 RAB1CQ92928 201 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 COQ2Q96H96 371 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 PRRT1Q99946 306 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 HDHD3Q9BSH5 251 aaPredicted RBP11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 MARVELD1Q9BSK0 173 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 TOLLIPQ9H0E2 274 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 PPA2Q9H2U2 334 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 DPAGT1Q9H3H5 408 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 BARX1Q9HBU1 254 aaPredicted RBP11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 METRNQ9UJH8 293 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 CHD3Q12873 2000 aaKnown RBP11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 DYSFO75923 2080 aa11.87□□□□□ -0.51
SHMT1P1-201ENST00000419974 IGHV3OR15-7A0A075B7D8 119 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 MEIS3P1A6NDR6 274 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 DISC1C4P0D8 188 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 HLA-DMAP28067 261 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 HRH1P35367 487 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ECI1P42126 302 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 GABRA2P47869 451 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 GMFBP60983 142 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 HOXA4Q00056 320 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CDK10Q15131 360 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 HMGN3Q15651 99 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 TRIM16LQ309B1 348 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 RNASE12Q5GAN4 147 aaKnown RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 FAM201AQ5SY85 155 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF660Q6AZW8 331 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR52W1Q6IF63 320 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 SPNS3Q6ZMD2 512 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 LHFPL1Q86WI0 220 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR5T2Q8NGG2 359 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 NEK7Q8TDX7 302 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 GIMAP1Q8WWP7 306 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CREB3L1Q96BA8 519 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 TIMD4Q96H15 378 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CYYR1Q96J86 154 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CCL19Q99731 98 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 TMEM246Q9BRR3 403 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CABLES2Q9BTV7 478 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OCEL1Q9H607 264 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 NECAP2Q9NVZ3 263 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF230Q9UIE0 474 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 SCP2D1Q9UJQ7 156 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 PCDHB10Q9UN67 800 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 NDUFS8O00217 210 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 NDUFB6O95139 128 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 GYPAP02724 150 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CGB3P0DN86 165 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CGB7P0DN87 165 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CEBPDP49716 269 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 P2RX3P56373 397 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 RBMS2Q15434 407 aaKnown RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 TMEM30BQ3MIR4 351 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CHRFAM7AQ494W8 412 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 KRBOX4Q5JUW0 171 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 C6orf183Q5T699 404 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CCBE1Q6UXH8 406 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 TMEM17Q86X19 198 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNF565Q8N9K5 539 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 BOLLQ8N9W6 283 aaKnown RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ZNRF1Q8ND25 227 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR4D10Q8NGI6 311 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR5H2Q8NGV7 314 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 ENKURQ8TC29 256 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 GSX2Q9BZM3 304 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 CHMP1AQ9HD42 196 aaPredicted RBP11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR6C3Q9NZP0 311 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 SLC23A1Q9UHI7 598 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 NUBP2Q9Y5Y2 271 aa11.86□□□□□ -0.51
SHMT1P1-201ENST00000419974 IGKV1D-8A0A087WSZ0 117 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 HSPB6O14558 160 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 TMPRSS2O15393 492 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 FABP7O15540 132 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 TCRBP04435 133 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 IFNA6P05013 189 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 FCER2P06734 321 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 CDKN1AP38936 164 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 OR3A3P47888 321 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 NPY4RP50391 375 aa11.85□□□□□ -0.51
SHMT1P1-201ENST00000419974 SEC61A1P61619 476 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms