RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 SNIP1Q8TAD8 396 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MRPL24Q96A35 216 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CXXC4Q9H2H0 198 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SEBOXQ9HB31 216 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZC4H2Q9NQZ6 224 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF71Q9NQZ8 489 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CYTL1Q9NRR1 136 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MBNL3Q9NUK0 354 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 C1QTNF9BB2RNN3 333 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 NXPH2O95156 264 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CGAP01215 116 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 HKR1P10072 659 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 VDAC1P21796 283 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LMO1P25800 156 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GCH1P30793 250 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MSMO1Q15800 293 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BEX5Q5H9J7 111 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 VWA1Q6PCB0 445 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BHLHA15Q7RTS1 189 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 WDR31Q8NA23 367 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PRR7Q8TB68 274 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ARL11Q969Q4 196 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CYYR1Q96J86 154 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SFXN3Q9BWM7 321 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TAAR3PQ9P1P4 343 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 DKK4Q9UBT3 224 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PURGQ9UJV8 347 aaKnown RBP12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 POMT1Q9Y6A1 747 aa12.37□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CNOT1A5YKK6 2376 aaKnown RBP12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 IFNL4K9M1U5 179 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BET1O15155 118 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LILRA1O75019 489 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CELA3BP08861 270 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CD200P41217 278 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TIMM23BQ5SRD1 257 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SPATA46Q5T0L3 261 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 IL34Q6ZMJ4 242 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF695Q8IW36 515 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 STARD4Q96DR4 205 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TAAR6Q96RI8 345 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TAS2R3Q9NYW6 316 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 UBE2J1Q9Y385 318 aaPredicted RBP12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 WIPI2Q9Y4P8 454 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SPEF1Q9Y4P9 236 aa12.36□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BORCS7-ASMTA0A0B4J1R7 106 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SLC33A1O00400 549 aaPredicted RBP12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 GPR137BO60478 399 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SCTP09683 121 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TRAT1Q6PIZ9 186 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PCSK4Q6UW60 755 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TBC1D26Q86UD7 250 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MYPOPQ86VE0 399 aaPredicted RBP12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 FAM90A1Q86YD7 464 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SLC35G3Q8N808 338 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR4D5Q8NGN0 318 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SECTM1Q8WVN6 248 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MARC2Q969Z3 335 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TAF9BQ9HBM6 251 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LPAR3Q9UBY5 353 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF292O60281 2723 aa12.35□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MSGN1A6NI15 193 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RNF212BA8MTL3 300 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR2H2O95918 312 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MBPP02686 304 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CECR9P0C854 216 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 BLOC1S1P78537 153 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PDCD1Q15116 288 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SMIM21Q3B7S5 101 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 C1orf185Q5T7R7 199 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TMEM268Q5VZI3 342 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LYZL2Q7Z4W2 148 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 WDR86Q86TI4 376 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZBTB34Q8NCN2 500 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 SUN5Q8TC36 379 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PCNPQ8WW12 178 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR51B6Q9H340 312 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 LIN7CQ9NUP9 197 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PRR13Q9NZ81 148 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 IL36RNQ9UBH0 155 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 INTS1Q8N201 2190 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 PROB1E7EW31 1015 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 MKRN2OSH3BPM6 223 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TIMM8AO60220 97 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RHBDL1O75783 438 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 F2RP25116 425 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RAB5CP51148 216 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RPS23P62266 143 aaKnown RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 HMGN3Q15651 99 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF324BQ6AW86 544 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 ZNF818PQ6ZRF7 136 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RELL2Q8NC24 303 aaPredicted RBP12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 OR10Z1Q8NGY1 313 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 RDH5Q92781 318 aa12.34□□□□□ -0.43
HLA-DPA1-242ENST00000419277 TP53RKQ96S44 253 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms