RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 DHRS7BQ6IAN0 325 aaPredicted RBP16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 SLC35E4Q6ICL7 350 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 ABHD12Q8N2K0 398 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 JAGN1Q8N5M9 183 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 FOXRED1Q96CU9 486 aaPredicted RBP16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 TMED9Q9BVK6 235 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 OR6C3Q9NZP0 311 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 RAB26Q9ULW5 256 aa16.61■□□□□ 0.25
PKNOX1-202ENST00000418336 BTBD17A6NE02 478 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 FAM90A22PA8MWA6 464 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 MAPK3P27361 379 aaPredicted RBP16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 KCNJ3P48549 501 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 C1orf100Q5SVJ3 147 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 LIPKQ5VXJ0 399 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 BRICD5Q6PL45 260 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 RTN4RL2Q86UN3 420 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 GAPTQ8N292 157 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 NKAIN3Q8N8D7 197 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 SGMS2Q8NHU3 365 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 THRSPQ92748 146 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 CNBD2Q96M20 576 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 Q96M66 194 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 UQCC2Q9BRT2 126 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 CALYQ9NYX4 217 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 TCF19Q9Y242 345 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 RNF114Q9Y508 228 aa16.6■□□□□ 0.25
PKNOX1-202ENST00000418336 MEIKINA0A087WXM9 373 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 TRAV39A0A0B4J263 110 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 FAM172BPA6NC97 362 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 OR7C1O76099 320 aaPredicted RBP16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 CSTBP04080 98 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 GTF2F2P13984 249 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 SSTR5P35346 364 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 RPS25P62851 125 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 DYNC1I2Q13409 638 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 PLA1AQ53H76 456 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 PHYHIPQ92561 330 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 MRPS24Q96EL2 167 aaKnown RBP16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 ZNF696Q9H7X3 374 aa16.59■□□□□ 0.25
PKNOX1-202ENST00000418336 VWFP04275 2813 aa16.58■□□□□ 0.25
PKNOX1-202ENST00000418336 C15orf65H3BRN8 121 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 IL1AP01583 271 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 CPEP16870 476 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 QRFPP83859 136 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 MLLT11Q13015 90 aaPredicted RBP16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 GPR176Q14439 515 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 HLA-DRB5Q30154 266 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 RBM48Q5RL73 367 aaKnown RBP16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 OR52W1Q6IF63 320 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 ZNF497Q6ZNH5 498 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 LIAT1Q6ZQX7 453 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 MRGPRDQ8TDS7 321 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 BARHL1Q9BZE3 327 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 BANF2Q9H503 90 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 FBLN5Q9UBX5 448 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 SIGLEC9Q9Y336 463 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 HILPDAQ9Y5L2 63 aa16.58■□□□□ 0.24
PKNOX1-202ENST00000418336 HTR1DP28221 377 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 VHLP40337 213 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 GLP1RP43220 463 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 TBCEQ15813 527 aaPredicted RBP16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM189A2Q15884 450 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 AWAT2Q6E213 333 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 CEACAM19Q7Z692 300 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 Q8N2B8 174 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 UFD1Q92890 307 aa16.57■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A10PA6NDY2 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A18PA6NE21 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A16PA6NEW6 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A20PA6NIJ5 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A7PA6NKC0 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A12PA8MX19 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A5PA8MXJ8 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A23PA8MXZ1 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 BUB1B-PAK6H3BSN5 160 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 MT-ND4P03905 459 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A15PP0C7V4 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A13PP0C7W8 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A14PP0C7W9 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM90A24PP0C7X0 464 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 MGMTP16455 207 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 SRMP19623 302 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 KIR2DS4P43632 304 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 EFNB2P52799 333 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 SSX1Q16384 188 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 FAM53AQ6NSI3 398 aaPredicted RBP16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 ZNF565Q8N9K5 539 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 TMEM203Q969S6 136 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 S100A13Q99584 98 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 MGLLQ99685 303 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 RANBP3Q9H6Z4 567 aaPredicted RBP16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 ZNF702PQ9H963 129 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 IDI2-AS1Q9NZ38 188 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 DPM3Q9P2X0 92 aa16.56■□□□□ 0.24
PKNOX1-202ENST00000418336 SLC22A1O15245 554 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 DENRO43583 198 aaKnown RBP16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 VSIG8P0DPA2 414 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 FABP5Q01469 135 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 TMEM219Q86XT9 240 aa16.55■□□□□ 0.24
PKNOX1-202ENST00000418336 OR10A7Q8NGE5 316 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms