RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 EMC6Q9BV81 110 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 PNRC2Q9NPJ4 139 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM106BQ9NUM4 274 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF581Q9P0T4 197 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 ADAM20O43506 726 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 HLA-HP01893 362 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CTSEP14091 401 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CHRNB4P30926 498 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CDKN1BP46527 198 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 BIDP55957 195 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 LCN2P80188 198 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TPTE2P1Q5T6R2 138 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 LRP11Q86VZ4 500 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF695Q8IW36 515 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 RSG1Q9BU20 258 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 OR51B6Q9H340 312 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 VSIRQ9H7M9 311 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 E9PLN8 166 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CHST1O43916 411 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 IGLV3-1P01715 115 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 PAX9P55771 341 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 HERV-K104P61576 105 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 SELENOTP62341 195 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 GABREP78334 506 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 MEF2BQ02080 365 aaPredicted RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 TLE3Q04726 772 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 SLC25A24Q6NUK1 477 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CPEB3Q8NE35 698 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 OR1N1Q8NGS0 311 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 PATE1Q8WXA2 126 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 MRPL13Q9BYD1 178 aaKnown RBP6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 FOXJ2Q9P0K8 574 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 B3GAT1Q9P2W7 334 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 RNF115Q9Y4L5 304 aa6.93□□□□□ -1.3
HMGXB4-202ENST00000418170 CCDC163A0A0D9SF12 145 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 NUPR1O60356 82 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 TSPAN2O60636 221 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 LILRA1O75019 489 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 TCN2P20062 427 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 AADACP22760 399 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 RPL15P61313 204 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 OOSP2Q86WS3 158 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 UEVLDQ8IX04 471 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 SELENOHQ8IZQ5 122 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PLPPR1Q8TBJ4 325 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PP6455Q8WZ26 134 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 SLC35E1Q96K37 410 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 LYZL4Q96KX0 146 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PSMG3Q9BT73 122 aaPredicted RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF286AQ9HBT8 521 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 UBE2J1Q9Y385 318 aaPredicted RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 C20orf202A1L168 122 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 C5orf63A6NC05 138 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 TMEM250H0YL14 139 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 RER1O15258 196 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 LEMD1Q68G75 181 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 EXTL1Q92935 676 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 IL22RA2Q969J5 263 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PIGTQ969N2 578 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 VDAC3Q9Y277 283 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 A0A1B0GUS0 222 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 DUXBA0A1W2PPF3 345 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 ZNF737O75373 536 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 MDH2P40926 338 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 KCNIP4Q6PIL6 250 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 METTL27Q8N6F8 245 aaPredicted RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 RPUSD4Q96CM3 377 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 GABRG3Q99928 467 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PNO1Q9NRX1 252 aaKnown RBP6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PAM16Q9Y3D7 125 aa6.92□□□□□ -1.3
HMGXB4-202ENST00000418170 PPYP01298 95 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 IGKV3-11P04433 115 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 TDGF1P13385 188 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 FAHP16930 419 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 IL3RAP26951 378 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 GCH1P30793 250 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 CST9LP1Q5W188 147 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 Q6ZWC4 215 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 SPOCK3Q9BQ16 436 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 VAMP8Q9BV40 100 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 PARLQ9H300 379 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 PLK3Q9H4B4 646 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 PXMP4Q9Y6I8 212 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 ATG2BQ96BY7 2078 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 SLC33A1O00400 549 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 DHRS3O75911 302 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 VDAC1P21796 283 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 EPHA8P29322 1005 aaPredicted RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 CDAP32320 146 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 GRB2P62993 217 aaKnown RBP6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 SERF2P84101 59 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 KCNMB1Q16558 191 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 TBC1D26Q86UD7 250 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 SCGB1C1Q8TD33 95 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 DYRK2Q92630 601 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 DDIT4LQ96D03 193 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 MYO7AQ13402 2215 aa6.91□□□□□ -1.3
HMGXB4-202ENST00000418170 TRBV11-1A0A0K0K1C0 115 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms