RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 C9orf16Q9BUW7 83 aa17.31■□□□□ 0.36
ACTB-203ENST00000417101 JAM3Q9BX67 310 aa17.31■□□□□ 0.36
ACTB-203ENST00000417101 LINC00574Q9H8X3 128 aa17.31■□□□□ 0.36
ACTB-203ENST00000417101 TAS2R4Q9NYW5 299 aa17.31■□□□□ 0.36
ACTB-203ENST00000417101 TRAV39A0A0B4J263 110 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 LOC100130705A0A1B0GUX0 176 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 MADCAM1Q13477 382 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 DIAPH2-AS1Q14236 149 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 HES1Q14469 280 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 RSBN1Q5VWQ0 802 aaPredicted RBP17.3■□□□□ 0.36
ACTB-203ENST00000417101 DRAM1Q8N682 238 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 MRPS18AQ9NVS2 196 aaKnown RBP17.3■□□□□ 0.36
ACTB-203ENST00000417101 ZNF581Q9P0T4 197 aa17.3■□□□□ 0.36
ACTB-203ENST00000417101 RPL36Q9Y3U8 105 aaKnown RBP17.3■□□□□ 0.36
ACTB-203ENST00000417101 A0A1W2PPI3 338 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 PSMB11A5LHX3 300 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 NPIPB11E5RHQ5 1161 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 HTR3BO95264 441 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 CLIC3O95833 236 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 LIMS3P0CW19 117 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 LIMS4P0CW20 117 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 SSTR5P35346 364 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 GNG10P50151 68 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 ZNF329Q86UD4 541 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 Q8NFD4 153 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 HAVCR2Q8TDQ0 301 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 GPR148Q8TDV2 347 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 RCC1LQ96I51 464 aaKnown RBP17.29■□□□□ 0.36
ACTB-203ENST00000417101 FAM118AQ9NWS6 357 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 ZNF281Q9Y2X9 895 aa17.29■□□□□ 0.36
ACTB-203ENST00000417101 CDRT1O95170 752 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 CD2P06729 351 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 TMEM11P17152 192 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 KCNJ3P48549 501 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 PAX5Q02548 391 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 HNF4GQ14541 408 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 XAF1Q6GPH4 301 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 ASCL4Q6XD76 172 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 APH1BQ8WW43 257 aa17.28■□□□□ 0.36
ACTB-203ENST00000417101 DPCDQ9BVM2 203 aaPredicted RBP17.28■□□□□ 0.36
ACTB-203ENST00000417101 RAB7AP51149 207 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 C10orf67Q8IYJ2 551 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 OR8H3Q8N146 312 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 C5orf56Q8N8D9 126 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 SUMF2Q8NBJ7 301 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 OR10A7Q8NGE5 316 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 OR10X1Q8NGY0 326 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 NOL4LQ96MY1 436 aaPredicted RBP17.27■□□□□ 0.36
ACTB-203ENST00000417101 ING4Q9UNL4 249 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 ST3GAL6Q9Y274 331 aa17.27■□□□□ 0.36
ACTB-203ENST00000417101 A0A1W2PPE3 182 aa17.26■□□□□ 0.35
ACTB-203ENST00000417101 K7EIL1 84 aa17.26■□□□□ 0.35
ACTB-203ENST00000417101 OR7C1O76099 320 aaPredicted RBP17.26■□□□□ 0.35
ACTB-203ENST00000417101 SMN1Q16637 294 aaKnown RBP17.26■□□□□ 0.35
ACTB-203ENST00000417101 RPL22L1Q6P5R6 122 aaKnown RBP17.26■□□□□ 0.35
ACTB-203ENST00000417101 SLC16A12Q6ZSM3 486 aa17.26■□□□□ 0.35
ACTB-203ENST00000417101 LINC00482Q8N8I6 264 aa17.26■□□□□ 0.35
ACTB-203ENST00000417101 TMEM106AQ96A25 262 aa17.26■□□□□ 0.35
ACTB-203ENST00000417101 FGF20Q9NP95 211 aaPredicted RBP17.26■□□□□ 0.35
ACTB-203ENST00000417101 DUS4LO95620 317 aaKnown RBP17.25■□□□□ 0.35
ACTB-203ENST00000417101 IGKV1D-33P01593 117 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 IGKV1-33P01594 117 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 ETV1P50549 477 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 RBM11P57052 281 aaKnown RBP17.25■□□□□ 0.35
ACTB-203ENST00000417101 KRTAP10-11P60412 298 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 PPP3R1P63098 170 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 CCDC58Q4VC31 144 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 DDI2Q5TDH0 399 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 OR52N1Q8NH53 320 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 CHPT1Q8WUD6 406 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 METTL9Q9H1A3 318 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 S100A14Q9HCY8 104 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 TMEM138Q9NPI0 162 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 DNAH9Q9NYC9 4486 aa17.25■□□□□ 0.35
ACTB-203ENST00000417101 SERPINE3A8MV23 424 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 GEMIN2O14893 280 aaKnown RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 FGF16O43320 207 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 WBP4O75554 376 aaKnown RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 CSTBP04080 98 aaKnown RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 ZNF93P35789 620 aaPredicted RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 NHLRC3Q5JS37 347 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 OR2G6Q5TZ20 316 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 ETV3LQ6ZN32 361 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 MRPL41Q8IXM3 137 aaKnown RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 PQLC1Q8N2U9 271 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 ORAI1Q96D31 301 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 IFT22Q9H7X7 185 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 IL36GQ9NZH8 169 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 LINC00527Q9UJ94 153 aa17.24■□□□□ 0.35
ACTB-203ENST00000417101 SIRT4Q9Y6E7 314 aaPredicted RBP17.24■□□□□ 0.35
ACTB-203ENST00000417101 COL7A1Q02388 2944 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 WI2-2373I1.2A0A1W2PRP0 233 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 TMEM30CPA0ZSE6 113 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 HSD17B6O14756 317 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 GZMHP20718 246 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 SERPINA2P20848 420 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 BDKRB2P30411 391 aa17.23■□□□□ 0.35
ACTB-203ENST00000417101 HOXD3P31249 432 aaPredicted RBP17.23■□□□□ 0.35
ACTB-203ENST00000417101 REG1BP48304 166 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms