RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 PAK1IP1Q9NWT1 392 aaPredicted RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 TAS2R4Q9NYW5 299 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 MTCH1Q9NZJ7 389 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ONECUT1Q9UBC0 465 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 PSORS1C1Q9UIG5 152 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 HHLA2Q9UM44 414 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 EXOSC1Q9Y3B2 195 aaKnown RBP4.01□□□□□ -1.77
VPS41-205ENST00000414632 AUP1Q9Y679 476 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 HSPE1-MOB4S4R3N1 261 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 FBN3Q75N90 2809 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 COL6A5A8TX70 2615 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 ANK2Q01484 3957 aa4.01□□□□□ -1.77
VPS41-205ENST00000414632 KIR2DS1A0A191URI9 304 aa4□□□□□ -1.77
VPS41-205ENST00000414632 MDFIC2A0A1B0GVS7 189 aa4□□□□□ -1.77
VPS41-205ENST00000414632 A0A1W2PRD5 423 aa4□□□□□ -1.77
VPS41-205ENST00000414632 A0A1W2PRF3 423 aa4□□□□□ -1.77
VPS41-205ENST00000414632 A0A1W2PRM7 423 aa4□□□□□ -1.77
VPS41-205ENST00000414632 IRGMA1A4Y4 181 aa4□□□□□ -1.77
VPS41-205ENST00000414632 EFCAB10A6NFE3 127 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RFPL4AA6NLU0 287 aa4□□□□□ -1.77
VPS41-205ENST00000414632 TMEM212A6NML5 194 aa4□□□□□ -1.77
VPS41-205ENST00000414632 DHRS7CA6NNS2 312 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RNF212BA8MTL3 300 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RFPL4AL1F8VTS6 287 aa4□□□□□ -1.77
VPS41-205ENST00000414632 J3QLI3 93 aa4□□□□□ -1.77
VPS41-205ENST00000414632 NDUFA2O43678 99 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ENSAO43768 121 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 VENTXO95231 258 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SERPINA3P01011 423 aa4□□□□□ -1.77
VPS41-205ENST00000414632 IFNA2P01563 188 aa4□□□□□ -1.77
VPS41-205ENST00000414632 MT-ND2P03891 347 aa4□□□□□ -1.77
VPS41-205ENST00000414632 CDK1P06493 297 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RPSAP08865 295 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 CCDC159P0C7I6 412 aa4□□□□□ -1.77
VPS41-205ENST00000414632 PIPP12273 146 aaPredicted RBP4□□□□□ -1.77
VPS41-205ENST00000414632 MUC1P15941 1255 aaPredicted RBP4□□□□□ -1.77
VPS41-205ENST00000414632 PRKACAP17612 351 aa4□□□□□ -1.77
VPS41-205ENST00000414632 MYF6P23409 242 aa4□□□□□ -1.77
VPS41-205ENST00000414632 TGM4P49221 684 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RBP2P50120 134 aa4□□□□□ -1.77
VPS41-205ENST00000414632 FUT6P51993 359 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ATP1B3P54709 279 aa4□□□□□ -1.77
VPS41-205ENST00000414632 MTCP1P56278 107 aa4□□□□□ -1.77
VPS41-205ENST00000414632 PAX8Q06710 450 aa4□□□□□ -1.77
VPS41-205ENST00000414632 KLRD1Q13241 179 aa4□□□□□ -1.77
VPS41-205ENST00000414632 INSL4Q14641 139 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SMIM21Q3B7S5 101 aa4□□□□□ -1.77
VPS41-205ENST00000414632 KRTAP24-1Q3LI83 254 aa4□□□□□ -1.77
VPS41-205ENST00000414632 LRRC10Q5BKY1 277 aa4□□□□□ -1.77
VPS41-205ENST00000414632 CST9LP1Q5W188 147 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SIGIRRQ6IA17 410 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ASPHD2Q6ICH7 369 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RPL22L1Q6P5R6 122 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 CRIP3Q6Q6R5 217 aa4□□□□□ -1.77
VPS41-205ENST00000414632 METAP1DQ6UB28 335 aaPredicted RBP4□□□□□ -1.77
VPS41-205ENST00000414632 BRD3OSQ6XYD6 125 aa4□□□□□ -1.77
VPS41-205ENST00000414632 TMPRSS11AQ6ZMR5 421 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ZNF788Q6ZQV5 615 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SLC36A1Q7Z2H8 476 aa4□□□□□ -1.77
VPS41-205ENST00000414632 BPIFB2Q8N4F0 458 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SIGLECL1Q8N7X8 197 aa4□□□□□ -1.77
VPS41-205ENST00000414632 OR4M1Q8NGD0 313 aa4□□□□□ -1.77
VPS41-205ENST00000414632 OR10K1Q8NGX5 313 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ANGPTL6Q8NI99 470 aa4□□□□□ -1.77
VPS41-205ENST00000414632 ZNF671Q8TAW3 534 aa4□□□□□ -1.77
VPS41-205ENST00000414632 NANPQ8TBE9 248 aa4□□□□□ -1.77
VPS41-205ENST00000414632 PP6455Q8WZ26 134 aa4□□□□□ -1.77
VPS41-205ENST00000414632 GHSRQ92847 366 aa4□□□□□ -1.77
VPS41-205ENST00000414632 EMG1Q92979 244 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 LHX4Q969G2 390 aa4□□□□□ -1.77
VPS41-205ENST00000414632 OPALINQ96PE5 141 aa4□□□□□ -1.77
VPS41-205ENST00000414632 DUX5Q96PT3 197 aa4□□□□□ -1.77
VPS41-205ENST00000414632 OR5M11Q96RB7 305 aa4□□□□□ -1.77
VPS41-205ENST00000414632 TBX15Q96SF7 602 aa4□□□□□ -1.77
VPS41-205ENST00000414632 CCDC90BQ9GZT6 254 aa4□□□□□ -1.77
VPS41-205ENST00000414632 FAM192AQ9GZU8 254 aa4□□□□□ -1.77
VPS41-205ENST00000414632 SIRT7Q9NRC8 400 aa4□□□□□ -1.77
VPS41-205ENST00000414632 TNFRSF19Q9NS68 423 aa4□□□□□ -1.77
VPS41-205ENST00000414632 CHCHD3Q9NX63 227 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 BABAM2Q9NXR7 383 aa4□□□□□ -1.77
VPS41-205ENST00000414632 RPUSD1Q9UJJ7 312 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 ZNF222Q9UK12 451 aa4□□□□□ -1.77
VPS41-205ENST00000414632 CAB39Q9Y376 341 aaPredicted RBP4□□□□□ -1.77
VPS41-205ENST00000414632 RRP15Q9Y3B9 282 aaKnown RBP4□□□□□ -1.77
VPS41-205ENST00000414632 MAB21L2Q9Y586 359 aa4□□□□□ -1.77
VPS41-205ENST00000414632 STAB1Q9NY15 2570 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 TRAV8-7A0A075B6U6 113 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PPIAL4CA0A0B4J2A2 164 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 IGKV1-12A0A0C4DH73 117 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MAGEA13PA6NCF6 341 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ZNF879B4DU55 563 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SIRPB1O00241 398 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 GABRPO00591 440 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 VCYO14598 125 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SIGLEC5O15389 551 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 TCF21O43680 179 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SULT1B1O43704 296 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 FSTL3O95633 263 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CYB5AP00167 134 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 FSHBP01225 129 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms