RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 CCDC144NLQ6NUI1 221 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 Q6ZPA2 131 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 ZFP41Q8N8Y5 198 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 ZNF565Q8N9K5 539 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 SUMF2Q8NBJ7 301 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 OR56B4Q8NH76 319 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 MRAPQ8TCY5 172 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 HAVCR2Q8TDQ0 301 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 BARHL1Q9BZE3 327 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 ST3GAL6Q9Y274 331 aa12.38□□□□□ -0.43
ACTB-202ENST00000414620 AMMECR1Q9Y4X0 333 aaPredicted RBP12.38□□□□□ -0.43
ACTB-202ENST00000414620 OR7C1O76099 320 aaPredicted RBP12.37□□□□□ -0.43
ACTB-202ENST00000414620 LALBAP00709 142 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 IGLL1P15814 213 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 HES1Q14469 280 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 LRRC36Q1X8D7 754 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 TMPRSS11AQ6ZMR5 421 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 DRAM1Q8N682 238 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 UBALD1Q8TB05 177 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 CYGBQ8WWM9 190 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 MYDGFQ969H8 173 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 DPCDQ9BVM2 203 aaPredicted RBP12.37□□□□□ -0.43
ACTB-202ENST00000414620 METTL9Q9H1A3 318 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 AURKAIP1Q9NWT8 199 aaPredicted RBP12.37□□□□□ -0.43
ACTB-202ENST00000414620 CLEC2DQ9UHP7 191 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 PSG11Q9UQ72 335 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 MOB4Q9Y3A3 225 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 HSPE1-MOB4S4R3N1 261 aa12.37□□□□□ -0.43
ACTB-202ENST00000414620 A0A1W2PP11 408 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 A0A1W2PPI3 338 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 MAGEA13PA6NCF6 341 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 OOSP1A8MZH6 123 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 EBAG9O00559 213 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 GEMIN2O14893 280 aaKnown RBP12.36□□□□□ -0.43
ACTB-202ENST00000414620 PIN1P1O15428 100 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 PF4P02776 101 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 CSTBP04080 98 aaKnown RBP12.36□□□□□ -0.43
ACTB-202ENST00000414620 MYL12AP19105 171 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 DCKP27707 260 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 BDKRB2P30411 391 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 ZNF93P35789 620 aaPredicted RBP12.36□□□□□ -0.43
ACTB-202ENST00000414620 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
ACTB-202ENST00000414620 HNF4GQ14541 408 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 CCDC58Q4VC31 144 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 ASCL4Q6XD76 172 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 OSR2Q8N2R0 312 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 SMIM19Q96E16 107 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 S100A13Q99584 98 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 TMEM138Q9NPI0 162 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 NECAP2Q9NVZ3 263 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 ZNF281Q9Y2X9 895 aa12.36□□□□□ -0.43
ACTB-202ENST00000414620 TSSC4Q9Y5U2 329 aaPredicted RBP12.36□□□□□ -0.43
ACTB-202ENST00000414620 PNMA8CA0A1B0GUJ8 204 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 NPIPB11E5RHQ5 1161 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 OGG1O15527 345 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 FAM106CPP0CH98 169 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 TMEM11P17152 192 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 KCNJ3P48549 501 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 MADCAM1Q13477 382 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 FOXB2Q5VYV0 432 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 REC114Q7Z4M0 266 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 Q8NFD4 153 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 OR10X1Q8NGY0 326 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 OR52N1Q8NH53 320 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 NEK7Q8TDX7 302 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 CCDC107Q8WV48 283 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 RDH12Q96NR8 316 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 ZNF184Q99676 751 aaPredicted RBP12.35□□□□□ -0.43
ACTB-202ENST00000414620 NCOR1P1Q9H4R4 102 aa12.35□□□□□ -0.43
ACTB-202ENST00000414620 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.35□□□□□ -0.43
ACTB-202ENST00000414620 DIMT1Q9UNQ2 313 aaKnown RBP12.35□□□□□ -0.43
ACTB-202ENST00000414620 EXOSC1Q9Y3B2 195 aaKnown RBP12.35□□□□□ -0.43
ACTB-202ENST00000414620 NOTCH3Q9UM47 2321 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 IGHV3-43A0A0B4J1X8 118 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 A0A1W2PPK0 400 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 TMEM30CPA0ZSE6 113 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 IRGMA1A4Y4 181 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A18PA6NE21 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A16PA6NEW6 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A9PA6NNJ1 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 IGKV1D-33P01593 117 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 IGKV1-33P01594 117 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 IGHV3-43DP0DP04 118 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 REG1BP48304 166 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 RIPK1Q13546 671 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 SLC22A6Q4U2R8 563 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
ACTB-202ENST00000414620 ZNF329Q86UD4 541 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 GHSRQ92847 366 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 PCDHB16Q9NRJ7 776 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 BABAM2Q9NXR7 383 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms