RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 MCRIP1C9JLW8 97 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 TIMM23O14925 209 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 PIN1P1O15428 100 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 CRTAPO75718 401 aaPredicted RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 HSMCR30P0CW71 290 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 GZMHP20718 246 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 BRS3P32247 399 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 KIR2DS4P43632 304 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 DYNLT3P51808 116 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 PROK1P58294 105 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 SRSF4Q08170 494 aaKnown RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 GPR50Q13585 617 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 RBM39Q14498 530 aaKnown RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 C17orf58Q2M2W7 97 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 ARSJQ5FYB0 599 aaPredicted RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 RBM48Q5RL73 367 aaKnown RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 PRR31Q5SQ13 230 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 RSBN1Q5VWQ0 802 aaPredicted RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 C11orf88Q6PI97 169 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 BAIAP2L2Q6UXY1 529 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 OR4P4Q8NGL7 312 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 OR13A1Q8NGR1 328 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 PLPPR1Q8TBJ4 325 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 PIFOQ8TCI5 191 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 MRGPRDQ8TDS7 321 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 CNBD2Q96M20 576 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 CITED1Q99966 193 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 UQCC2Q9BRT2 126 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 DUSP21Q9H596 190 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 RANBP3Q9H6Z4 567 aaPredicted RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 ZNF286AQ9HBT8 521 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 CALYQ9NYX4 217 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 IDI2-AS1Q9NZ38 188 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 FBLN5Q9UBX5 448 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 BLOC1S6Q9UL45 172 aa9.05□□□□□ -0.96
RFFL-204ENST00000414419 TET2Q6N021 2002 aaPredicted RBP9.05□□□□□ -0.96
RFFL-204ENST00000414419 M0QZ24 198 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 IL1AP01583 271 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 MGMTP16455 207 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 CD34P28906 385 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 GDNFP39905 211 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 MNDAP41218 407 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 PAX5Q02548 391 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 IRF3Q14653 427 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 LTC4SQ16873 150 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 HLA-DRB5Q30154 266 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 HSD17B12Q53GQ0 312 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 LDLRAD2Q5SZI1 272 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 LIPKQ5VXJ0 399 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 GLT8D1Q68CQ7 371 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 UNQ9370/PRO34162Q6UXP9 181 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 CEACAM19Q7Z692 300 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 TMEM219Q86XT9 240 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 OR10A7Q8NGE5 316 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 OR9G1Q8NH87 305 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 RFESDQ8TAC1 157 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 CAPSLQ8WWF8 208 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 SGCDQ92629 289 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 KIRREL1Q96J84 757 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 SELENOIQ9C0D9 397 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 CST11Q9H112 138 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 BANF2Q9H503 90 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 GHRLQ9UBU3 117 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 RAB26Q9ULW5 256 aa9.04□□□□□ -0.96
RFFL-204ENST00000414419 LSM2Q9Y333 95 aaKnown RBP9.04□□□□□ -0.96
RFFL-204ENST00000414419 AMMECR1Q9Y4X0 333 aaPredicted RBP9.04□□□□□ -0.96
RFFL-204ENST00000414419 A0A087X0M5 115 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 A0A1B0GX30 115 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 A6NDX4 124 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A10PA6NDY2 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A18PA6NE21 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A16PA6NEW6 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A20PA6NIJ5 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A7PA6NKC0 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A22PA8MWA6 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A12PA8MX19 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A5PA8MXJ8 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A23PA8MXZ1 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 BUB1B-PAK6H3BSN5 160 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 AIPO00170 330 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CHST1O43916 411 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 PEX14O75381 377 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 ATP6V1G2O95670 118 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 IGLV1-47P01700 117 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A15PP0C7V4 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A13PP0C7W8 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A14PP0C7W9 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 FAM90A24PP0C7X0 464 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 UBBP0CG47 229 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CGB3P0DN86 165 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CGB7P0DN87 165 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 SRMP19623 302 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CRHBPP24387 322 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 VHLP40337 213 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 INSL4Q14641 139 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 TRAM1Q15629 374 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 RAB12Q6IQ22 244 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 CCDC144NLQ6NUI1 221 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 TREML4Q6UXN2 200 aa9.03□□□□□ -0.96
RFFL-204ENST00000414419 Q6ZTK2 550 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms