RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 GATCO43716 136 aaKnown RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 ZNF354AO60765 605 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 HLA-AP01891 365 aaKnown RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 CALB1P05937 261 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 IGKV1-13P0DP09 117 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 GFAPP14136 432 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 RAB5AP20339 215 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 NR4A2P43354 598 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 GPR6P46095 362 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 NDUFV3P56181 108 aaKnown RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 RAB8AP61006 207 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 AP1S1P61966 158 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 NUTF2P61970 127 aaKnown RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 ARF6P62330 175 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 PLGLB1Q02325 96 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 CD164Q04900 197 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 MXD1Q05195 221 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 TAF1AQ15573 450 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 TRIP13Q15645 432 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 NRF1Q16656 503 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 TBC1D28Q2M2D7 210 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 CNPY1Q3B7I2 92 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 OR2T5Q6IEZ7 315 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 FOXL2NBQ6ZUU3 175 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 LRRTM1Q86UE6 522 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 P2RY8Q86VZ1 359 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 RPS19BP1Q86WX3 136 aaKnown RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 C9orf40Q8IXQ3 194 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 OR2T29Q8NH02 315 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 LCN9Q8WX39 176 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 CHCHD10Q8WYQ3 142 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 SCAND2PQ9GZW5 306 aaPredicted RBP3.31□□□□□ -1.88
TOP2B-202ENST00000413971 ARL6Q9H0F7 186 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 ABCB9Q9NP78 766 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 OR12D3Q9UGF7 316 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 NEU3Q9UQ49 428 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 V9GY05 133 aa3.31□□□□□ -1.88
TOP2B-202ENST00000413971 TINCRA0A1B0GVN0 87 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 PINLYPA6NC86 204 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 FAM72CH0Y354 149 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 IDH3BO43837 385 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 AIFM1O95831 613 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TOMM40O96008 361 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TYMSP04818 313 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 CT45A10P0DMU9 189 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 HIST1H1CP16403 213 aaKnown RBP3.3□□□□□ -1.88
TOP2B-202ENST00000413971 VDAC1P21796 283 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 IL2RGP31785 369 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 BTCP35070 178 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 SPRP35270 261 aaPredicted RBP3.3□□□□□ -1.88
TOP2B-202ENST00000413971 KLF9Q13886 244 aaPredicted RBP3.3□□□□□ -1.88
TOP2B-202ENST00000413971 ZNF266Q14584 549 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 ARL6IP1Q15041 203 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TMEM30BQ3MIR4 351 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 KLF17Q5JT82 389 aaPredicted RBP3.3□□□□□ -1.88
TOP2B-202ENST00000413971 CASC10Q5T4H9 136 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 FAM72AQ5TYM5 149 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 HACD4Q5VWC8 232 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 FAM72DQ6L9T8 149 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 CCDC121Q6ZUS5 278 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 FAM72BQ86X60 149 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TRAPPC5Q8IUR0 188 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 C10orf67Q8IYJ2 551 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TBC1D19Q8N5T2 526 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 OR52E2Q8NGJ4 325 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 OR51G1Q8NGK1 321 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 OR2A1Q8NGT9 310 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 FLVCR1-AS1Q8TAF5 88 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 C10orf105Q8TEF2 133 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 AP3S1Q92572 193 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 S100PBPQ96BU1 408 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 SMIM19Q96E16 107 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 C20orf173Q96LM9 149 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 KCTD7Q96MP8 289 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 ZNF599Q96NL3 588 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 SMIM14Q96QK8 99 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 P2RX4Q99571 388 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 NRTNQ99748 197 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TMEM204Q9BSN7 226 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TMEM208Q9BTX3 173 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 SRXN1Q9BYN0 137 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TTTY12Q9BZ98 90 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 DHX35Q9H5Z1 703 aaKnown RBP3.3□□□□□ -1.88
TOP2B-202ENST00000413971 ZNF442Q9H7R0 627 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 TMEM27Q9HBJ8 222 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 CALYQ9NYX4 217 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 UVRAGQ9P2Y5 699 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 OPN4Q9UHM6 478 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 USH1CQ9Y6N9 552 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 KIAA1109Q2LD37 5005 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 ABCA13Q86UQ4 5058 aa3.3□□□□□ -1.88
TOP2B-202ENST00000413971 PLXNB1O43157 2135 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 TRGV5A0A0B4J1U4 118 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 FAM240AA0A1B0GVK7 77 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 DNAJC9-AS1A6NH13 148 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 GLSO94925 669 aaPredicted RBP3.29□□□□□ -1.88
TOP2B-202ENST00000413971 CDK1P06493 297 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 SPINT3P49223 89 aa3.29□□□□□ -1.88
TOP2B-202ENST00000413971 UBA52P62987 128 aaKnown RBP3.29□□□□□ -1.88
TOP2B-202ENST00000413971 FKBP3Q00688 224 aaKnown RBP3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms