RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 RFPL4AA6NLU0 287 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 RFPL4AL1F8VTS6 287 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 OR7C1O76099 320 aaPredicted RBP14.47□□□□□ -0.09
PTPRC-206ENST00000413409 IGLV1-44P01699 117 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 GLAP06280 429 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 AKR1C4P17516 323 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 VAMP1P23763 118 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 C20orf204Q6ZNR8 217 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 BEND4Q6ZU67 534 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 C1orf174Q8IYL3 243 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 PIK3IP1Q96FE7 263 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 RTBDNQ9BSG5 229 aaPredicted RBP14.47□□□□□ -0.09
PTPRC-206ENST00000413409 OR51I2Q9H344 312 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 MTCH1Q9NZJ7 389 aa14.47□□□□□ -0.09
PTPRC-206ENST00000413409 LRP5LA4QPB2 252 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 MCRIP1C9JLW8 97 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 L7N2F9 121 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 SDCBPO00560 298 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 CD5LO43866 347 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 LILRA1O75019 489 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 CTSDP07339 412 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 OR5H8P0DN80 308 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 S100A1P23297 94 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 NFYAP23511 347 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 LOXP28300 417 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 C1QTNF12Q5T7M4 302 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 HAGHLQ6PII5 290 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 TEX261Q6UWH6 196 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 BHLHA15Q7RTS1 189 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 BHLHE23Q8NDY6 225 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 GTF3AQ92664 365 aaKnown RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 WDR89Q96FK6 387 aaPredicted RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 WFIKKN1Q96NZ8 548 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 OR51B6Q9H340 312 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 ZNF442Q9H7R0 627 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 IFT22Q9H7X7 185 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 C14orf166Q9Y224 244 aaKnown RBP14.46□□□□□ -0.09
PTPRC-206ENST00000413409 U3KQ87 197 aa14.46□□□□□ -0.09
PTPRC-206ENST00000413409 TRAV14DV4A0A0A6YYC5 116 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 TMEM210A6NLX4 147 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 SYNGR1O43759 233 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 TSC22D2O75157 780 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 FAM157CP0CG43 387 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 SLC25A4P12235 298 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 PGAM2P15259 253 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 RPS2P15880 293 aaKnown RBP14.45□□□□□ -0.1
PTPRC-206ENST00000413409 RPA2P15927 270 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 CXCL2P19875 107 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 UCP2P55851 309 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 SPATA46Q5T0L3 261 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 TMEM65Q6PI78 240 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 DHRS11Q6UWP2 260 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 Q8IYB0 196 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 OR8H1Q8NGG4 311 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 COQ8AQ8NI60 647 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 SLC25A40Q8TBP6 338 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF2Q9BSG1 426 aaPredicted RBP14.45□□□□□ -0.1
PTPRC-206ENST00000413409 ADAT1Q9BUB4 502 aaKnown RBP14.45□□□□□ -0.1
PTPRC-206ENST00000413409 REG4Q9BYZ8 158 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 OR2J1Q9GZK6 312 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 FXYD6Q9H0Q3 95 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 RAB18Q9NP72 206 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 NDRG3Q9UGV2 375 aa14.45□□□□□ -0.1
PTPRC-206ENST00000413409 FXYD6-FXYD2A0A087WZ82 144 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 A0A1W2PR80 420 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 OR5H1A6NKK0 313 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 NAPSAO96009 420 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 IFNA7P01567 189 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 CA6P23280 308 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 GLP1RP43220 463 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 OPCMLQ14982 345 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 C3orf36Q3SXR2 165 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 FAM76BQ5HYJ3 339 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 SLC22A25Q6T423 547 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 SLC7A5P1Q8MH63 180 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF610Q8N9Z0 462 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 OR1J1Q8NGS3 322 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 CASTOR1Q8WTX7 329 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 DYRK2Q92630 601 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 PDCD10Q9BUL8 212 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 SFXN3Q9BWM7 321 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 BCL2L14Q9BZR8 327 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 OPN3Q9H1Y3 402 aaPredicted RBP14.44□□□□□ -0.1
PTPRC-206ENST00000413409 RIMS4Q9H426 269 aaPredicted RBP14.44□□□□□ -0.1
PTPRC-206ENST00000413409 COMMD9Q9P000 198 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 POLDIP2Q9Y2S7 368 aa14.44□□□□□ -0.1
PTPRC-206ENST00000413409 TRBV6-6A0A0A6YYG2 114 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 POM121CA8CG34 1229 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 CECR9P0C854 216 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 PRKACAP17612 351 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 IL32P24001 234 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 CALCRP30988 508 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 HTR2BP41595 481 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 UCP3P55916 312 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 ATP5J2P56134 94 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 SUPT4H1P63272 117 aaKnown RBP14.43□□□□□ -0.1
PTPRC-206ENST00000413409 TSC22D1Q15714 1073 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 ZNF680Q8NEM1 530 aa14.43□□□□□ -0.1
PTPRC-206ENST00000413409 MARS2Q96GW9 593 aaKnown RBP14.43□□□□□ -0.1
PTPRC-206ENST00000413409 TENM1Q9UKZ4 2725 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms