RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 OPN5Q6U736 354 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 CENPVQ7Z7K6 275 aaPredicted RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 SP8Q8IXZ3 490 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PIANPQ8IYJ0 282 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 IL22RA1Q8N6P7 574 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 NEUROG1Q92886 237 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 NIPSNAP3BQ9BS92 247 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 HINT3Q9NQE9 182 aaKnown RBP4.52□□□□□ -1.69
HERC4-205ENST00000412272 FBXL7Q9UJT9 491 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 PLAGL1Q9UM63 463 aa4.52□□□□□ -1.69
HERC4-205ENST00000412272 MAP1LC3B2A6NCE7 125 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 KIAA1324LA8MWY0 1029 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 PIN1P1O15428 100 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF217O75362 1048 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 FOXH1O75593 365 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 EPPINO95925 133 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LMO2P25791 158 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ATP6V0CP27449 155 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 NSG1P42857 185 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 WIPI1Q5MNZ9 446 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 SLC39A11Q8N1S5 342 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 KLHDC1Q8N7A1 406 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SLC38A5Q8WUX1 472 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 MAP1LC3BQ9GZQ8 125 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CLCF1Q9UBD9 225 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF214Q9UL59 606 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 MRPS33Q9Y291 106 aaKnown RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 MUC21A0A0G2JKD1 596 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TRBV5-5A0A0J9YX44 114 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 MUC21A0A140T8X8 626 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SMIM28A0A1B0GU29 152 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 MEIS3P2A8K0S8 358 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SLC31A1O15431 190 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF207O43670 478 aaKnown RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF286BP0CG31 522 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SLURP2P0DP57 97 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CEBPBP17676 345 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SOAT1P35610 550 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TAS2R31P59538 309 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SEC61GP60059 68 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 MEF2CQ06413 473 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 MUC21Q5SSG8 566 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LRRC69Q6ZNQ3 347 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 DPY19L4Q7Z388 723 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CYB561D1Q8N8Q1 229 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CMTM2Q8TAZ6 248 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 DDB2Q92466 427 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 MS4A4AQ96JQ5 239 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 DERL3Q96Q80 235 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 JMJD8Q96S16 334 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 HCAR1Q9BXC0 346 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 JKAMPQ9P055 326 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 KIAA1456Q9P272 454 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 DEGS1O15121 323 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TUSC2O75896 110 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 IFNA1P01562 189 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CELA3BP08861 270 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF728P0DKX0 622 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 GPR1P46091 355 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 OR3A4PP47883 348 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TPPP2P59282 170 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 PNRC1Q12796 327 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 IGFBP7Q16270 282 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 CPSF6Q16630 551 aaKnown RBP eCLIP4.51□□□□□ -1.69
HERC4-205ENST00000412272 UPP1Q16831 310 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 EMC4Q5J8M3 183 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SLC18B1Q6NT16 456 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LILRA6Q6PI73 481 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 GLB1LQ6UWU2 654 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LRRC75A-AS1Q8N1F1 130 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 BAHD1Q8TBE0 780 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 DIO2Q92813 273 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 VSTM2LQ96N03 204 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 GP6Q9HCN6 339 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LAMP3Q9UQV4 416 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LTBP3Q9NS15 1303 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 FAM231BA6NCW3 169 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 RBFOX3A6NFN3 312 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 FABP5P3A8MUU1 101 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 F5H768 121 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 NRG2O14511 850 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 NKX2-8O15522 239 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TNFSF12O43508 249 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SFT2D2O95562 160 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ABHD16AO95870 558 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TYMSP04818 313 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 LSSP48449 732 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 GNG4P50150 75 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF133P52736 654 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 RND3P61587 244 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 SNRPNP63162 240 aaKnown RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 POU3F1Q03052 451 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 FAM162BQ5T6X4 162 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TMEM78Q5T7P6 136 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 TMEM211Q6ICI0 200 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 FAM166AQ6J272 317 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 OR10V1Q8NGI7 309 aa4.51□□□□□ -1.69
HERC4-205ENST00000412272 PTPMT1Q8WUK0 201 aaPredicted RBP4.51□□□□□ -1.69
HERC4-205ENST00000412272 ZNF480Q8WV37 535 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms