RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 SCGB1D4Q6XE38 83 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 LYG2Q86SG7 212 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 SLC25A45Q8N413 288 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CD177Q8N6Q3 437 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 SLC35G3Q8N808 338 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CEP170P1Q96L14 293 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CAMK2N2Q96S95 79 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 HOPXQ9BPY8 73 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF649Q9BS31 505 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 TBL1XR1Q9BZK7 514 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 OR52D1Q9H346 318 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 TXNIPQ9H3M7 391 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 TRABDQ9H4I3 376 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 WFDC1Q9HC57 220 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 RPS10P5Q9NQ39 176 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF391Q9UJN7 358 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF223Q9UK11 482 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF706Q9Y5V0 76 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-204ENST00000412061 AGRNO00468 2067 aa3.15□□□□□ -1.91
BRCA1-204ENST00000412061 CCDC144AA2RUR9 1427 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ROCK1Q13464 1354 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF532Q9HCE3 1301 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 LOC102724200A0A096LPH7 203 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 IGKV6-21A0A0C4DH24 114 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 IGHV5-51A0A0C4DH38 117 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 TEX50A0A1B0GTY4 177 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 FAM168BA1KXE4 195 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 CD300LBA8K4G0 201 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 KLLNB2CW77 178 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 TRIM49D1C9J1S8 452 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 K7EQS6 105 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 EIF1BO60739 113 aaKnown RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 GCM2O75603 506 aaPredicted RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 HBZP02008 142 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ATP5G1P05496 136 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 IGHV4-34P06331 123 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 SOD3P08294 240 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 SLC6A1P30531 599 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 EIF1P41567 113 aaKnown RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 CDK9P50750 372 aaKnown RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 RAP1AP62834 184 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 HPCAP84074 193 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 IFITM2Q01629 132 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 DAZ2Q13117 558 aaKnown RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM42Q69YG0 159 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 GLYATQ6IB77 296 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF773Q6PK81 442 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 DHRS4L2Q6PKH6 230 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 SMIM15Q7Z3B0 74 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 TMED4Q7Z7H5 227 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ITPRIPQ8IWB1 547 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ZIC4Q8N9L1 334 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 OR1L1Q8NH94 360 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ZNRF2Q8NHG8 242 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 COQ8AQ8NI60 647 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 C15orf40Q8WUR7 153 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 TNFAIP8L1Q8WVP5 186 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 YPEL4Q96NS1 127 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 OR52B2Q96RD2 323 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 NOX3Q9HBY0 568 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 DAZ3Q9NR90 486 aaKnown RBP3.14□□□□□ -1.91
BRCA1-204ENST00000412061 CA10Q9NS85 328 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 HDGFL3Q9Y3E1 203 aa3.14□□□□□ -1.91
BRCA1-204ENST00000412061 ZBED9Q6R2W3 1325 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 IGLV1-50A0A075B6I6 118 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 IGHV1OR15-9A0A0B4J2B8 117 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 C5orf63A6NC05 138 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 OR5H1A6NKK0 313 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 C2orf74A8MZ97 194 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 ANGPTL7O43827 346 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 CD5P06127 495 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 CST2P09228 141 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 OR4A8P0C604 315 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 SCGB1C2P0DMR2 95 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 GADD45AP24522 165 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 IMPA1P29218 277 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 TAF6P49848 677 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 RAB2AP61019 212 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 RAB5BP61020 215 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 EDDM3AQ14507 147 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM97Q5BJF2 176 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 MESTQ5EB52 335 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM215Q68D42 235 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 ELP2Q6IA86 826 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 GUSBP11Q6P575 273 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 IGFL2Q6UWQ7 119 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 Q6ZR54 194 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 SHISA6Q6ZSJ9 500 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 FAM19A3Q7Z5A8 133 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 VN1R4Q7Z5H5 301 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 ZNF429Q86V71 674 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 TMEM86BQ8N661 226 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 NATD1Q8N6N6 113 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 OR1L8Q8NGR8 309 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 LINC01006Q8NI28 216 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 SCGB1C1Q8TD33 95 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 Q8WTZ3 238 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 BMFQ96LC9 184 aa3.13□□□□□ -1.91
BRCA1-204ENST00000412061 OLFM3Q96PB7 478 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms