RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 CIB1Q99828 191 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 LINC00574Q9H8X3 128 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 MYRFQ9Y2G1 1151 aa13.15□□□□□ -0.3
MRPL55-220ENST00000411464 LINC01548A6NM66 108 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 SLC16A6O15403 523 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 RPLP1P05386 114 aaKnown RBP13.14□□□□□ -0.31
MRPL55-220ENST00000411464 ECI1P42126 302 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 MTNR1BP49286 362 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 KIR2DS1Q14954 304 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 KISS1Q15726 138 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 LCNL1Q6ZST4 164 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 OR10A7Q8NGE5 316 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 OR5D14Q8NGL3 314 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 OR10AC1Q8NH08 325 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 ASCL2Q99929 193 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 GABARAPL1Q9H0R8 117 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 RIBC2Q9H4K1 309 aa13.14□□□□□ -0.31
MRPL55-220ENST00000411464 NPIPB11E5RHQ5 1161 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 HSD17B6O14756 317 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 GAPDHP04406 335 aaKnown RBP13.13□□□□□ -0.31
MRPL55-220ENST00000411464 FASP25445 335 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 GPR12P47775 334 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 CDX1P47902 265 aaPredicted RBP13.13□□□□□ -0.31
MRPL55-220ENST00000411464 GPR50Q13585 617 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 EBI3Q14213 229 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 DEFB136Q30KP8 78 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 NKAPLQ5M9Q1 402 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 TGIF2LXQ8IUE1 241 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 CNIH3Q8TBE1 160 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 MRGPRDQ8TDS7 321 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 ABCG5Q9H222 651 aa13.13□□□□□ -0.31
MRPL55-220ENST00000411464 TRAV24A0A0B4J272 114 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 A0A1W2PPE3 182 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 SEC14L6B5MCN3 397 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 J3QLW9 94 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 CCRL2O00421 344 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 MPZL2O60487 215 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 ZNF19P17023 458 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 ZP1P60852 638 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 FOXE3Q13461 319 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 ELP2Q6IA86 826 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 SERPINA12Q8IW75 414 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 OR2T10Q8NGZ9 312 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 EAF1Q96JC9 268 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-220ENST00000411464 GABARAPL3Q9BY60 117 aa13.12□□□□□ -0.31
MRPL55-220ENST00000411464 LIN7CQ9NUP9 197 aaKnown RBP13.12□□□□□ -0.31
MRPL55-220ENST00000411464 SIRT4Q9Y6E7 314 aaPredicted RBP13.12□□□□□ -0.31
MRPL55-220ENST00000411464 IGHV3-72A0A0B4J1Y9 119 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 IGHV1-3A0A0C4DH29 117 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 ERICH4A6NGS2 130 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 OR4C45A6NMZ5 311 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 SULT1B1O43704 296 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 RRP9O43818 475 aaKnown RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 ELANEP08246 267 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 SSTR5P35346 364 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 REG1BP48304 166 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 KCNJ3P48549 501 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 ZNF816Q0VGE8 651 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 ALKBH1Q13686 389 aaKnown RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 ZNF691Q5VV52 312 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 RSBN1Q5VWQ0 802 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 AMIGO2Q86SJ2 522 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 TRUB1Q8WWH5 349 aaKnown RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 RNFT2Q96EX2 444 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 CPNE2Q96FN4 548 aaPredicted RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 MRPL48Q96GC5 212 aaKnown RBP13.11□□□□□ -0.31
MRPL55-220ENST00000411464 FAM118AQ9NWS6 357 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 IMPAD1Q9NX62 359 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 SCOCQ9UIL1 159 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 AP4S1Q9Y587 144 aa13.11□□□□□ -0.31
MRPL55-220ENST00000411464 TRAV39A0A0B4J263 110 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 MAGEB3O15480 346 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 RPSAP08865 295 aaKnown RBP13.1□□□□□ -0.31
MRPL55-220ENST00000411464 GZMHP20718 246 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 PAX5Q02548 391 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 IL13RA2Q14627 380 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 SATL1Q86VE3 508 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 IZUMO1Q8IYV9 350 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 PARP16Q8N5Y8 322 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 Q8N9W7 124 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 PXT1Q8NFP0 134 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 PLPPR1Q8TBJ4 325 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 PELI1Q96FA3 418 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 C4orf36Q96KX1 117 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-220ENST00000411464 GPER1Q99527 375 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 RASL11BQ9BPW5 248 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 ZNF256Q9Y2P7 627 aaPredicted RBP13.1□□□□□ -0.31
MRPL55-220ENST00000411464 KIAA2026Q5HYC2 2103 aa13.1□□□□□ -0.31
MRPL55-220ENST00000411464 J3QRE1 110 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 FCGR1AP12314 374 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 CHATP28329 748 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 RSU1Q15404 277 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 ZNF260Q3ZCT1 412 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 LPCAT4Q643R3 524 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 RNF152Q8N8N0 203 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 TNFAIP8L1Q8WVP5 186 aa13.09□□□□□ -0.31
MRPL55-220ENST00000411464 LY86O95711 162 aa13.08□□□□□ -0.32
MRPL55-220ENST00000411464 MOSP00540 346 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms