RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 SLC43A2Q8N370 569 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 TEX29Q8N6K0 151 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 METTL13Q8N6R0 699 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 C5orf56Q8N8D9 126 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 DYNC2LI1Q8TCX1 351 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 RSPH1Q8WYR4 309 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 GOLGA1Q92805 767 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 LEAP2Q969E1 77 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 PINX1Q96BK5 328 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 MRRFQ96E11 262 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 DERL3Q96Q80 235 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM47Q9BQJ4 181 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 MIEN1Q9BRT3 115 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR2D2Q9H210 308 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 DPH5Q9H2P9 285 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ANKEF1Q9NU02 776 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 LIN7CQ9NUP9 197 aaKnown RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 ARGLU1Q9NWB6 273 aaPredicted RBP-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 OBP2AQ9NY56 170 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 TBC1D7Q9P0N9 293 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 CLEC4AQ9UMR7 237 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 KDM3BQ7LBC6 1761 aa-2.36□□□□□ -2.79
RNU4-88P-201ENST00000411220 HMGXB3Q12766 1538 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 ZNF644Q9H582 1327 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 GOLGA3Q08378 1498 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 GRIN2AQ12879 1464 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 A0A0B4J2A0 478 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 SAGE2PA6NJ88 616 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 CD300LBA8K4G0 201 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDZK1P1A8MUH7 402 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 G3V318 75 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 DDX39AO00148 427 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 FCN1O00602 326 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 NDUFAB1O14561 156 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PLEKHA8P1O95397 391 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 LSM8O95777 96 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PENKP01210 267 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 LGALS2P05162 132 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 POLBP06746 335 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 HEXAP06865 529 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 HTR1AP08908 422 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 CD79AP11912 226 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PORP16435 677 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 AKAP5P24588 427 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 GGT2P36268 569 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 ATP5C1P36542 298 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 RPL5P46777 297 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 XCL1P47992 114 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 ARFIP2P53365 341 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 MVDP53602 400 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 SNRPEP62304 92 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 RPL23P62829 140 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 CDK16Q00536 496 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 BEX3Q00994 111 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM115Q12893 351 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PPP1R8Q12972 351 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 SELENBP1Q13228 472 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 RCAN2Q14206 197 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 BECN1Q14457 450 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 KARSQ15046 597 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDK4Q16654 411 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 NDUFA5Q16718 116 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 HIST2H2ACQ16777 129 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TCP11X2Q5H9J9 407 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TWF2Q6IBS0 349 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PYHIN1Q6K0P9 492 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAHD1Q6P587 224 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 LYPD5Q6UWN5 251 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 FAM159AQ6UWV7 190 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TMEM179Q6ZVK1 233 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 COPS6Q7L5N1 327 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 MDP1Q86V88 176 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 IQCA1Q86XH1 822 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TDRPQ86YL5 185 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDPNQ86YL7 162 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 WFDC13Q8IUB5 93 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 CPXCR1Q8N123 301 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PDIK1LQ8N165 341 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TBC1D19Q8N5T2 526 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 CLRN3Q8NCR9 226 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 BHLHE23Q8NDY6 225 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR56B1Q8NGI3 324 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR52B4Q8NGK2 314 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR8D4Q8NGM9 314 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR1L8Q8NGR8 309 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OR10G6Q8NH81 332 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 NFKBIDQ8NI38 313 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 MAGEE2Q8TD90 523 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 MITD1Q8WV92 249 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 TSACCQ96A04 125 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 ADIPOR1Q96A54 375 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 C8orf44Q96CB5 159 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 OPTNQ96CV9 577 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 KTI12Q96EK9 354 aaPredicted RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 PGAM5Q96HS1 289 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 COG3Q96JB2 828 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 C1orf74Q96LT6 269 aa-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 XPO6Q96QU8 1125 aaKnown RBP-2.37□□□□□ -2.79
RNU4-88P-201ENST00000411220 BCL7BQ9BQE9 202 aa-2.37□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms