RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 NCKAP5O14513 1909 aa14.3□□□□□ -0.12
LIMS2-208ENST00000410011 SSSCA1O60232 199 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 HSPB1P04792 205 aaKnown RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 OR13C7P0DN81 318 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 DAOP14920 347 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 ARF1P84077 181 aaKnown RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 RBMXL1Q96E39 390 aaKnown RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 RARRES2Q99969 163 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 GLRX2Q9NS18 164 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 BOKQ9UMX3 212 aaPredicted RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 TNRC6AQ8NDV7 1962 aaKnown RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 IGKV1D-13A0A0B4J2D9 117 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 TRAPPC2LH3BP13 241 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 IGKV1-13P0DP09 117 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 RPS23P62266 143 aaKnown RBP14.29□□□□□ -0.12
LIMS2-208ENST00000410011 CCL20P78556 96 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 PCSK4Q6UW60 755 aa14.29□□□□□ -0.12
LIMS2-208ENST00000410011 TRAV1-1A0A0B4J248 108 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 A0A1W2PPE3 182 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 TMEM50AO95807 157 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 CER1O95813 267 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 IFNA17P01571 189 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 SRP19P09132 144 aaKnown RBP14.28□□□□□ -0.12
LIMS2-208ENST00000410011 TDGF1P13385 188 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 S100GP29377 79 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 ASCL1P50553 236 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 DYNLT3P51808 116 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 FABP9Q0Z7S8 132 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF506Q5JVG8 444 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 ZNF880Q6PDB4 577 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 HEPN1Q6WQI6 88 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 UBALD2Q8IYN6 164 aa14.28□□□□□ -0.12
LIMS2-208ENST00000410011 IGKV1-6A0A0C4DH72 117 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 AP4M1O00189 453 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 GPR37O15354 613 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 PGLYRP1O75594 196 aaPredicted RBP14.27□□□□□ -0.12
LIMS2-208ENST00000410011 HBE1P02100 147 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 ARG1P05089 322 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 OTX2P32243 289 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 GPM6AP51674 278 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 TLE4Q04727 773 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 DCAF12Q5T6F0 453 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 MRPL21Q7Z2W9 205 aaKnown RBP14.27□□□□□ -0.12
LIMS2-208ENST00000410011 ZFP62Q8NB50 900 aaPredicted RBP14.27□□□□□ -0.12
LIMS2-208ENST00000410011 SUMF1Q8NBK3 374 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 OR10G4Q8NGN3 311 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 ATP5SQ99766 215 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 PRDM6Q9NQX0 595 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 CCL28Q9NRJ3 127 aa14.27□□□□□ -0.12
LIMS2-208ENST00000410011 A0A1B0GU03 582 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 hCG_1809904A0A1W2PP81 198 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 A0A1W2PPE2 198 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 A0A1W2PR64 198 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 A0A1W2PRV1 198 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 PINLYPA6NC86 204 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 CXorf65A6NEN9 183 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 CHST1O43916 411 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 DFFBO76075 338 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 OR2C1O95371 312 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 F2RP25116 425 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 PAX9P55771 341 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 TAS2R30P59541 319 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 ADAM5Q6NVV9 412 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 PSMF1Q92530 271 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 TCEAL3Q969E4 200 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 MUCL1Q96DR8 90 aa14.27□□□□□ -0.13
LIMS2-208ENST00000410011 HSD17B6O14756 317 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 ARR3P36575 388 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 RAB2AP61019 212 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 TCTEX1D2Q8WW35 142 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 HS3ST6Q96QI5 342 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 ABHD14AQ9BUJ0 271 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 C5orf49A4QMS7 147 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 LRP5LA4QPB2 252 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 NPIPB11E5RHQ5 1161 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 H3BQ15 152 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 OR8U8P0C7N1 319 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 OMGP23515 440 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 LHX2P50458 406 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 TGIF1Q15583 401 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 KHDC3LQ587J8 217 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 ZNF324BQ6AW86 544 aaPredicted RBP14.26□□□□□ -0.13
LIMS2-208ENST00000410011 RBMS3Q6XE24 437 aaKnown RBP14.26□□□□□ -0.13
LIMS2-208ENST00000410011 MRPL30Q8TCC3 161 aaKnown RBP14.26□□□□□ -0.13
LIMS2-208ENST00000410011 HIST1H2AAQ96QV6 131 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 RAB40CQ96S21 281 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 FAM173AQ9BQD7 235 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 CABLES2Q9BTV7 478 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 MAGT1Q9H0U3 335 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 TAAR3PQ9P1P4 343 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 OR2W1Q9Y3N9 320 aa14.26□□□□□ -0.13
LIMS2-208ENST00000410011 PUS1Q9Y606 427 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMS2-208ENST00000410011 CDRT15L2A8MXV6 281 aa14.25□□□□□ -0.13
LIMS2-208ENST00000410011 SCAF4O95104 1147 aaKnown RBP14.25□□□□□ -0.13
LIMS2-208ENST00000410011 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
LIMS2-208ENST00000410011 AKR1C8PQ5T2L2 129 aa14.25□□□□□ -0.13
LIMS2-208ENST00000410011 C6orf15Q6UXA7 325 aaPredicted RBP14.25□□□□□ -0.13
LIMS2-208ENST00000410011 NANPQ8TBE9 248 aa14.25□□□□□ -0.13
LIMS2-208ENST00000410011 OR5P3Q8WZ94 311 aa14.25□□□□□ -0.13
LIMS2-208ENST00000410011 POM121L2Q96KW2 1035 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms