RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 PABPC1L2AQ5JQF8 200 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TIMM23BQ5SRD1 257 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 LIPKQ5VXJ0 399 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TMEM53Q6P2H8 277 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ARL9Q6T311 187 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 DRAM2Q6UX65 266 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 UNQ9370/PRO34162Q6UXP9 181 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 TMEM91Q6ZNR0 172 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 FAM220AQ7Z4H9 259 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 LUZP2Q86TE4 346 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 MDP1Q86V88 176 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ELMOD2Q8IZ81 293 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 YIPF7Q8N8F6 280 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZFP41Q8N8Y5 198 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 OR8B12Q8NGG6 310 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 LILRB4Q8NHJ6 448 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 AKR7LQ8NHP1 331 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF420Q8TAQ5 688 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 SLC7A6Q92536 515 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 RGP1Q92546 391 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 UFD1Q92890 307 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 S100PBPQ96BU1 408 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ISOC1Q96CN7 298 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 MRPL48Q96GC5 212 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF799Q96GE5 643 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 C1orf147Q96MC9 270 aaPredicted RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 PDCD1LG2Q9BQ51 273 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 BCL7BQ9BQE9 202 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 FUNDC2Q9BWH2 189 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 OCR1Q9BZK8 76 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 NAA50Q9GZZ1 169 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 NIPAL2Q9H841 368 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 MOB1AQ9H8S9 216 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 BATF3Q9NR55 127 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 GPR173Q9NS66 373 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CENPMQ9NSP4 180 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 NDUFA13Q9P0J0 144 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ZNF319Q9P2F9 582 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 NUFIP1Q9UHK0 495 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 CHD3Q12873 2000 aaKnown RBP3.35□□□□□ -1.87
CLK1-203ENST00000409769 NBEAQ8NFP9 2946 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 ARFGEF3Q5TH69 2177 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 CFAP46Q8IYW2 2715 aa3.35□□□□□ -1.87
CLK1-203ENST00000409769 RAI1Q7Z5J4 1906 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 DOPEY1Q5JWR5 2465 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ZNF462Q96JM2 2506 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 PKDREJQ9NTG1 2253 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 IGHV1-18A0A0C4DH31 117 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 TRBV2A0A0J9YWF9 115 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 A0A0U1RQV5 110 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 A0A1B0GTI1 187 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 TMEM269A0A1B0GVZ9 245 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 OOEPA6NGQ2 149 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 TMEM212A6NML5 194 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 EEF1E1-BLOC1S5C9J1V9 151 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 F5H5K5 113 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 LOC110117498-PIK3R3F6TDL0 507 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 H3BMQ9 156 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GABRPO00591 440 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 PIN1P1O15428 100 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 MLNRO43193 412 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 EEF1E1O43324 174 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 GPRIN2O60269 458 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 RPP14O95059 124 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 APOC1P02654 83 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 HLA-DPB1P04440 258 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 RLN1P04808 185 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ISG15P05161 165 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 CECR9P0C854 216 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 DNAH10OSP0CZ25 163 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SLC2A1P11166 492 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 CD79AP11912 226 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ZNF35P13682 527 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 IL32P24001 234 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GADD45AP24522 165 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 PSMA1P25786 263 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 STOMP27105 288 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 HSD11B1P28845 292 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 FGF9P31371 208 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 HTR5AP47898 357 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 NPBWR1P48145 328 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GDI2P50395 445 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 IDH3GP51553 393 aaPredicted RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 PRKXP51817 358 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 UBE2NP61088 152 aaKnown RBP3.34□□□□□ -1.87
CLK1-203ENST00000409769 SRPXP78539 464 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GALK2Q01415 458 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 FABP5Q01469 135 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SLC3A1Q07837 685 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 INSL4Q14641 139 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 TRAM1Q15629 374 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 YIF1BQ5BJH7 314 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 GPR107Q5VW38 600 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ASPHD2Q6ICH7 369 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 ZNF841Q6ZN19 808 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 Q6ZR54 194 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 SSX8Q7RTT4 187 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 NAA40Q86UY6 237 aa3.34□□□□□ -1.87
CLK1-203ENST00000409769 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms