RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 RSBN1Q5VWQ0 802 aaPredicted RBP11.75□□□□□ -0.53
CBX3-203ENST00000409747 ASCL4Q6XD76 172 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 Q6ZPA2 131 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 WFDC9Q8NEX5 89 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 RGP1Q92546 391 aaPredicted RBP11.75□□□□□ -0.53
CBX3-203ENST00000409747 METTL9Q9H1A3 318 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 IFT22Q9H7X7 185 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 IL36GQ9NZH8 169 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 ST3GAL6Q9Y274 331 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 DNAH3Q8TD57 4116 aa11.75□□□□□ -0.53
CBX3-203ENST00000409747 NPIPB11E5RHQ5 1161 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 HTR3BO95264 441 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 PRB2P02812 416 aaPredicted RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 ZNF93P35789 620 aaPredicted RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 SLC35A2P78381 396 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 MED21Q13503 144 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 C9orf152Q5JTZ5 239 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 DDI2Q5TDH0 399 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 OR8H3Q8N146 312 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 OSR2Q8N2R0 312 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 OR10K1Q8NGX5 313 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 MRGPRDQ8TDS7 321 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 MYDGFQ969H8 173 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 SMIM19Q96E16 107 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 DPCDQ9BVM2 203 aaPredicted RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A18PA6NE21 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A16PA6NEW6 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A20PA6NIJ5 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A9PA6NNJ1 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A12PA8MX19 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A5PA8MXJ8 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 ZNF780AO75290 641 aaPredicted RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 WBP4O75554 376 aaKnown RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 AMY1AP04745 511 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 AMY2AP04746 511 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A15PP0C7V4 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A13PP0C7W8 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A14PP0C7W9 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 FAM90A24PP0C7X0 464 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 LOXL3P58215 753 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 KHDC1LQ5JSQ8 128 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 OR56B4Q8NH76 319 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 CKLFQ9UBR5 152 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 ING4Q9UNL4 249 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 PSG11Q9UQ72 335 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 ZNF281Q9Y2X9 895 aa11.74□□□□□ -0.53
CBX3-203ENST00000409747 EXOSC1Q9Y3B2 195 aaKnown RBP11.74□□□□□ -0.53
CBX3-203ENST00000409747 OR7C1O76099 320 aaPredicted RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 CDRT1O95170 752 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 DUS4LO95620 317 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 SNRNP70P08621 437 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 GZMHP20718 246 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 BDKRB2P30411 391 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 SSTR5P35346 364 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 ETV1P50549 477 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 RBM11P57052 281 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 HES1Q14469 280 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 SMN1Q16637 294 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 MPV17LQ2QL34 196 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 TCTEX1D4Q5JR98 221 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 XAF1Q6GPH4 301 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 SUMF2Q8NBJ7 301 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 RCC1LQ96I51 464 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 AURKAIP1Q9NWT8 199 aaPredicted RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 CHCHD3Q9NX63 227 aaKnown RBP11.73□□□□□ -0.53
CBX3-203ENST00000409747 BABAM2Q9NXR7 383 aa11.73□□□□□ -0.53
CBX3-203ENST00000409747 A0A1W2PPI3 338 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 TMEM30CPA0ZSE6 113 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 PSMB11A5LHX3 300 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 EBAG9O00559 213 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 FGF16O43320 207 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 BAG2O95816 211 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 TMEM11P17152 192 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 GNG10P50151 68 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 RIPK1Q13546 671 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 GPR176Q14439 515 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 LTC4SQ16873 150 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 UTF1Q5T230 341 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 OR2G6Q5TZ20 316 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 DRAM1Q8N682 238 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 OR52N1Q8NH53 320 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 RFESDQ8TAC1 157 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 LEAP2Q969E1 77 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 DIMT1Q9UNQ2 313 aaKnown RBP11.72□□□□□ -0.53
CBX3-203ENST00000409747 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 SH2D7A6NKC9 451 aaPredicted RBP11.72□□□□□ -0.53
CBX3-203ENST00000409747 OGG1O15527 345 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 IGHV3-7P01780 117 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 IGLL1P15814 213 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 SERPINA2P20848 420 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 YIF1BQ5BJH7 314 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 FOXB2Q5VYV0 432 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 SETD9Q8NE22 299 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 SPACA1Q9HBV2 294 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 RAB9BQ9NP90 201 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 C8orf4Q9NR00 106 aa11.72□□□□□ -0.53
CBX3-203ENST00000409747 HSD17B6O14756 317 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms