RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 GUCA1AP43080 201 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF41P51814 821 aaPredicted RBP13.35□□□□□ -0.27
LIMS2-205ENST00000409455 FAM69BQ5VUD6 431 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF695Q8IW36 515 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 OR6X1Q8NH79 312 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 C10orf35Q96D05 121 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 CALHM2Q9HA72 323 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 OR14J1Q9UGF5 321 aa13.35□□□□□ -0.27
LIMS2-205ENST00000409455 A0A1B0GWJ7 208 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 ZNF705GA8MUZ8 300 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-205ENST00000409455 ANGPTL7O43827 346 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 CDCP2Q5VXM1 449 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 DYRK2Q92630 601 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 ABHD14BQ96IU4 210 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 RBM14Q96PK6 669 aaKnown RBP13.34□□□□□ -0.27
LIMS2-205ENST00000409455 TMEM222Q9H0R3 208 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 LRFN1Q9P244 771 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 TRAV1-1A0A0B4J248 108 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 ZFP92A6NM28 416 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 MPPED1O15442 326 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 EPHA1P21709 976 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 CASP6P55212 293 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 C16orf47Q6ZP98 133 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-205ENST00000409455 ADPRHL1Q8NDY3 354 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 OR1P1Q8NH06 330 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 OR4X1Q8NH49 305 aa13.34□□□□□ -0.27
LIMS2-205ENST00000409455 UBE2J1Q9Y385 318 aaPredicted RBP13.34□□□□□ -0.27
LIMS2-205ENST00000409455 FAM221AA4D161 298 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 GCGP01275 180 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 BCL2P10415 239 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 RNF4P78317 190 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF880Q6PDB4 577 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 H1FOOQ8IZA3 346 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 FAM185AQ8N0U4 392 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 IL22RA1Q8N6P7 574 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 NAXEQ8NCW5 288 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 NFAM1Q8NET5 270 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 ATP5SQ99766 215 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 CTDSP1Q9GZU7 261 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 GPR173Q9NS66 373 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 CISD1Q9NZ45 108 aaKnown RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF581Q9P0T4 197 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 SPRY1O43609 319 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 OPN1LWP04000 364 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 AADACP22760 399 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 TAS2R30P59541 319 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 CXorf66Q5JRM2 361 aaPredicted RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 MRPL14Q6P1L8 145 aaKnown RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 C5orf24Q7Z6I8 188 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 C20orf196Q8IYI0 205 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 GJC3Q8NFK1 279 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 MRGPRX4Q96LA9 322 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 SRD5A3Q9H8P0 318 aa13.33□□□□□ -0.28
LIMS2-205ENST00000409455 PTRH2Q9Y3E5 179 aaKnown RBP13.33□□□□□ -0.28
LIMS2-205ENST00000409455 CACNA1HO95180 2353 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 EFNA2O43921 213 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 MDKP21741 143 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-205ENST00000409455 MPV17LQ2QL34 196 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 SLC25A24Q6NUK1 477 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 THAP3Q8WTV1 239 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-205ENST00000409455 SDF2L1Q9HCN8 221 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 ADAM20O43506 726 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 TLX3O43711 291 aaPredicted RBP13.32□□□□□ -0.28
LIMS2-205ENST00000409455 PPYP01298 95 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 CD59P13987 128 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF154Q13106 437 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 HIST3H3Q16695 136 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 BRICD5Q6PL45 260 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 PPP1R14DQ9NXH3 145 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 KLRF1Q9NZS2 232 aa13.32□□□□□ -0.28
LIMS2-205ENST00000409455 XKRY2A2RUG3 117 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 EREGO14944 169 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 MMP9P14780 707 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 MSR1P21757 451 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 APLNRP35414 380 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 TNFRSF9Q07011 255 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF787Q6DD87 383 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 DTX1Q86Y01 620 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 C17orf78Q8N4C9 275 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 TMEM56Q96MV1 263 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 GAB2Q9UQC2 676 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 TMEM56-RWDD3S4R434 201 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 A0A1W2PNR3 127 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 IFNA5P01569 189 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 COL10A1Q03692 680 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 CA5BP1Q8WTZ4 195 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 OXGR1Q96P68 337 aa13.31□□□□□ -0.28
LIMS2-205ENST00000409455 SHANK1Q9Y566 2161 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 M0R135 149 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 NR2C1P13056 603 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 IL24Q13007 206 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 PLPPR5Q32ZL2 321 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 SPIN3Q5JUX0 258 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 TBC1D26Q86UD7 250 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 THNSL2Q86YJ6 484 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 ODF3L1Q8IXM7 274 aa13.3□□□□□ -0.28
LIMS2-205ENST00000409455 ZNF799Q96GE5 643 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms