RNA–Protein interactions for RNA: ENST00000409286.5

LIMS2-204, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,678 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-204ENST00000409286 MRPL24Q96A35 216 aaKnown RBP16.38■□□□□ 0.21
LIMS2-204ENST00000409286 MSI2Q96DH6 328 aaKnown RBP16.38■□□□□ 0.21
LIMS2-204ENST00000409286 C18orf12Q96KH6 178 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 CITED4Q96RK1 184 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 ARPC5LQ9BPX5 153 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 FBXO9Q9UK97 447 aaPredicted RBP16.38■□□□□ 0.21
LIMS2-204ENST00000409286 FZR1Q9UM11 496 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 ESPL1Q14674 2120 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 SHANK1Q9Y566 2161 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 APC2O95996 2303 aa16.38■□□□□ 0.21
LIMS2-204ENST00000409286 C1QTNF9BB2RNN3 333 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 NPIPB11E5RHQ5 1161 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 M0R1B8 84 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 GPR31O00270 319 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 LMO1P25800 156 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 SRPXP78539 464 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 RAB32Q13637 225 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 C5orf24Q7Z6I8 188 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 OR11L1Q8NGX0 322 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 SPDEFO95238 335 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 HAND1O96004 215 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 CRYAAP02489 173 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 ZNF250P15622 560 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 RCC1P18754 421 aaPredicted RBP16.37■□□□□ 0.21
LIMS2-204ENST00000409286 PLPPR1Q8TBJ4 325 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 CNTNAP3BQ96NU0 1288 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 USB1Q9BQ65 265 aaKnown RBP16.37■□□□□ 0.21
LIMS2-204ENST00000409286 CNTNAP3Q9BZ76 1288 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 SLC5A7Q9GZV3 580 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 WIPI2Q9Y4P8 454 aa16.37■□□□□ 0.21
LIMS2-204ENST00000409286 CFAP47Q6ZTR5 3102 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 ACACAQ13085 2346 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 C3orf85A0A1B0GTC6 90 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 PHF1O43189 567 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-204ENST00000409286 GLRXP35754 106 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 BEX5Q5H9J7 111 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 WDR82Q6UXN9 313 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 H1FOOQ8IZA3 346 aaPredicted RBP16.36■□□□□ 0.21
LIMS2-204ENST00000409286 OR10J5Q8NHC4 309 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 PRR7Q8TB68 274 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 SECTM1Q8WVN6 248 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 PHYHIPLQ96FC7 376 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 AQP10Q96PS8 301 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 MSL2Q9HCI7 577 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 MED9Q9NWA0 146 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 OR5AC2Q9NZP5 309 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 ZNF835Q9Y2P0 537 aa16.36■□□□□ 0.21
LIMS2-204ENST00000409286 IGHV3-64DA0A0J9YX35 117 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 IGHV3-13P01766 116 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 RLN2P04090 185 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 RRASP10301 218 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 CD200P41217 278 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 UCNP55089 124 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 PRAMEF6Q5VXH4 476 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 ACP7Q6ZNF0 438 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 MRGPRGQ86SM5 289 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 COMMD7Q86VX2 200 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 PCNPQ8WW12 178 aaKnown RBP16.35■□□□□ 0.21
LIMS2-204ENST00000409286 RRNAD1Q96FB5 475 aaKnown RBP16.35■□□□□ 0.21
LIMS2-204ENST00000409286 KIRREL1Q96J84 757 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 ZNF471Q9BX82 626 aaPredicted RBP16.35■□□□□ 0.21
LIMS2-204ENST00000409286 TAAR3PQ9P1P4 343 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 OR2W1Q9Y3N9 320 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 TMED3Q9Y3Q3 217 aa16.35■□□□□ 0.21
LIMS2-204ENST00000409286 IGKV1D-13A0A0B4J2D9 117 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 A6NLC8 198 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 F5H0A9 414 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-204ENST00000409286 NMBP08949 121 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 IGKV1-13P0DP09 117 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 LUMP51884 338 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-204ENST00000409286 NKX6-1P78426 367 aaPredicted RBP16.34■□□□□ 0.21
LIMS2-204ENST00000409286 GFRALQ6UXV0 394 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 ZNF818PQ6ZRF7 136 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 ZNF826PQ6ZT77 177 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 LYZL2Q7Z4W2 148 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TBC1D26Q86UD7 250 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 OR1S1Q8NH92 325 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TMEM56Q96MV1 263 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TMEM222Q9H0R3 208 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 SLC25A32Q9H2D1 315 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 ZFP57Q9NU63 452 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 MBNL3Q9NUK0 354 aaKnown RBP16.34■□□□□ 0.21
LIMS2-204ENST00000409286 ELOVL5Q9NYP7 299 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TRAPPC2LQ9UL33 140 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TMEM56-RWDD3S4R434 201 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 IFNL4K9M1U5 179 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 PTBP3O95758 552 aaKnown RBP16.34■□□□□ 0.21
LIMS2-204ENST00000409286 BMP5P22003 454 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TMPRSS3P57727 454 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 S100A10P60903 97 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 SMCO1Q147U7 214 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 CMTM1Q8IZ96 169 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 STOML3Q8TAV4 291 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 TP53RKQ96S44 253 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 OR14J1Q9UGF5 321 aa16.34■□□□□ 0.21
LIMS2-204ENST00000409286 SPTBN2O15020 2390 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 A0A0G2JNJ9 132 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 WNT9BO14905 357 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 S100GP29377 79 aa16.33■□□□□ 0.2
LIMS2-204ENST00000409286 RPS23P62266 143 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms