RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 PLCE1Q9P212 2302 aa11.25□□□□□ -0.61
PTPRN-202ENST00000409251 TMEM14DPA8MWL7 114 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 TSPAN2O60636 221 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 GZMBP10144 247 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 FAM3BP58499 235 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 RPP30P78346 268 aaKnown RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 PMP22Q01453 160 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 ISXQ2M1V0 245 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 PIGYQ3MUY2 71 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF468Q5VIY5 522 aaPredicted RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF787Q6DD87 383 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 OR8G2PQ6IF36 304 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 TOMM20LQ6UXN7 152 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 IL22RA1Q8N6P7 574 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 SCGB1C1Q8TD33 95 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 SGCZQ96LD1 299 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 MRPL37Q9BZE1 423 aaKnown RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 GOLT1BQ9Y3E0 138 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 DMXL2Q8TDJ6 3036 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 AMBPP02760 352 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 DEFA4P12838 97 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF266Q14584 549 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 FAM103A1Q9BTL3 118 aaKnown RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 MYOTQ9UBF9 498 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 C9J4A7 227 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 C3orf80F5H4A9 247 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 CER1O95813 267 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 IFNA5P01569 189 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 SRP19P09132 144 aaKnown RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 FSTP19883 344 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 RAET1LQ5VY80 246 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 ERASQ7Z444 233 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 LFNGQ8NES3 379 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 OSGIN2Q9Y236 505 aa11.24□□□□□ -0.61
PTPRN-202ENST00000409251 STRAPQ9Y3F4 350 aaKnown RBP11.24□□□□□ -0.61
PTPRN-202ENST00000409251 IGSF23A1L1A6 192 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 H7BYZ3 331 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 GAPDHP04406 335 aaKnown RBP11.23□□□□□ -0.61
PTPRN-202ENST00000409251 VAX1Q5SQQ9 334 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 SNHG12Q9BXW3 62 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 ALG1L2C9J202 215 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 ZFAND5O76080 213 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 NUTF2P61970 127 aaKnown RBP11.23□□□□□ -0.61
PTPRN-202ENST00000409251 OR5AS1Q8N127 324 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 OR4X1Q8NH49 305 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 RASL10BQ96S79 203 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 LIME1Q9H400 295 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 FAM206AQ9NX38 181 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 AQP7O14520 342 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 METTL15P1P0C7V9 234 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF41P51814 821 aaPredicted RBP11.23□□□□□ -0.61
PTPRN-202ENST00000409251 TGFBR3Q03167 851 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 RABEPKQ7Z6M1 372 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 P4HTMQ9NXG6 502 aa11.23□□□□□ -0.61
PTPRN-202ENST00000409251 M0R143 59 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 GALR2O43603 387 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 SPINK4O60575 86 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 GNG10P50151 68 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 H1FNTQ75WM6 255 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 TMEM171Q8WVE6 324 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 SYT3Q9BQG1 590 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 NAA60Q9H7X0 242 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 ANXA10Q9UJ72 324 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 LOXL2Q9Y4K0 774 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 NCOA6Q14686 2063 aaPredicted RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 GRIFINA4D1Z8 144 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 CHST1O43916 411 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 RPS2P15880 293 aaKnown RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF43P17038 809 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 DAP3P51398 398 aaKnown RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 UCP3P55916 312 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 TLE4Q04727 773 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 YRDCQ86U90 279 aaKnown RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 WDR5BQ86VZ2 330 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 OR10A7Q8NGE5 316 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 M1APQ8TC57 530 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 RBMXL1Q96E39 390 aaKnown RBP11.22□□□□□ -0.61
PTPRN-202ENST00000409251 TP53RKQ96S44 253 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 PCNX1Q96RV3 2341 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 IGKV1-9A0A0C4DH69 117 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 C19orf67A6NJJ6 358 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 VSTM2BA6NLU5 285 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 CCL3P10147 92 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 GLIPR1P48060 266 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 CSNK1A1P48729 337 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 SRYQ05066 204 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 ATP1A1-AS1Q5TC04 95 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 FBXL14Q8N1E6 418 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 ZNF519Q8TB69 540 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 TMEM204Q9BSN7 226 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 NDUFAF3Q9BU61 184 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 VSIRQ9H7M9 311 aa11.22□□□□□ -0.61
PTPRN-202ENST00000409251 TRAV39A0A0B4J263 110 aa11.21□□□□□ -0.61
PTPRN-202ENST00000409251 A8MWP6 167 aa11.21□□□□□ -0.61
PTPRN-202ENST00000409251 IGHV3-9P01782 118 aa11.21□□□□□ -0.61
PTPRN-202ENST00000409251 LCATP04180 440 aa11.21□□□□□ -0.61
PTPRN-202ENST00000409251 CST2P09228 141 aa11.21□□□□□ -0.61
PTPRN-202ENST00000409251 UBE2G2P60604 165 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms