RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 LINC00596Q86U02 117 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 OR4K15Q8NH41 348 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 CLDND2Q8NHS1 167 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 UBALD1Q8TB05 177 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 ST8SIA4Q92187 359 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 H1FXQ92522 213 aaKnown RBP6.92□□□□□ -1.3
GPC3-203ENST00000406757 SNX22Q96L94 193 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 TSC22D3Q99576 134 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 SOSTQ9BQB4 213 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 CHMP1AQ9HD42 196 aaPredicted RBP6.92□□□□□ -1.3
GPC3-203ENST00000406757 AKIP1Q9NQ31 210 aa6.92□□□□□ -1.3
GPC3-203ENST00000406757 RCC2Q9P258 522 aaKnown RBP6.92□□□□□ -1.3
GPC3-203ENST00000406757 SLC25A10Q9UBX3 287 aaPredicted RBP6.92□□□□□ -1.3
GPC3-203ENST00000406757 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
GPC3-203ENST00000406757 A0A096LNT2 108 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 LINC00854A0A1B0GVQ3 168 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A10PA6NDY2 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A18PA6NE21 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A16PA6NEW6 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A20PA6NIJ5 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A8PA6NJQ4 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A7PA6NKC0 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A22PA8MWA6 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A12PA8MX19 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A5PA8MXJ8 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A23PA8MXZ1 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 VWC2LB2RUY7 222 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 K7N7A8 449 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 LANCL1O43813 399 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 CD3GP09693 182 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A15PP0C7V4 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A13PP0C7W8 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A14PP0C7W9 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 FAM90A24PP0C7X0 464 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 PRSS3P35030 304 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 GNG2P59768 71 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 ERVFRD-1P60508 538 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 TMEM249Q2WGJ8 235 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 TMEM155Q4W5P6 130 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 KRBOX4Q5JUW0 171 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 SPANXN2Q5MJ10 180 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 PYHIN1Q6K0P9 492 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 ZNF841Q6ZN19 808 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 SLC36A1Q7Z2H8 476 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 TRAPPC6BQ86SZ2 158 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 MUC20Q8N307 709 aaPredicted RBP6.91□□□□□ -1.3
GPC3-203ENST00000406757 ZNF561Q8N587 486 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 GVQW1Q8N7I0 195 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 OR52I2Q8NH67 350 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 COQ2Q96H96 371 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 MED30Q96HR3 178 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 SDHCQ99643 169 aaPredicted RBP6.91□□□□□ -1.3
GPC3-203ENST00000406757 CMSS1Q9BQ75 279 aaKnown RBP6.91□□□□□ -1.3
GPC3-203ENST00000406757 ST6GALNAC5Q9BVH7 336 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 SRRQ9GZT4 340 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 IFT22Q9H7X7 185 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 PATZ1Q9HBE1 687 aaKnown RBP6.91□□□□□ -1.3
GPC3-203ENST00000406757 LPAR2Q9HBW0 351 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 C19orf12Q9NSK7 152 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 KIF25Q9UIL4 384 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 CDC42EP3Q9UKI2 254 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 HSF4Q9ULV5 492 aa6.91□□□□□ -1.3
GPC3-203ENST00000406757 IGKV1D-8A0A087WSZ0 117 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 MEIKINA0A087WXM9 373 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 A0A0A6YYH2 397 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 A6NJ64 397 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 FAM157AC9JC47 383 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 NDUFA2O43678 99 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 MT-ND4P03905 459 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 GSTP1P09211 210 aaKnown RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 RCC1P18754 421 aaPredicted RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 ZFP36P26651 326 aaKnown RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 ETV6P41212 452 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 LMO4P61968 165 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 LCN2P80188 198 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 SRSF2Q01130 221 aaKnown RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 PRB3Q04118 309 aaPredicted RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 RBM39Q14498 530 aaKnown RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 ZNF846Q147U1 533 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 KCNJ8Q15842 424 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 FAM189A2Q15884 450 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 BAK1Q16611 211 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 KRTAP24-1Q3LI83 254 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 LRRC10Q5BKY1 277 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 HACD4Q5VWC8 232 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 RSBN1Q5VWQ0 802 aaPredicted RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 FAM53AQ6NSI3 398 aaPredicted RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 BTN2A1Q7KYR7 527 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 GDPD3Q7L5L3 318 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 FAM185AQ8N0U4 392 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 OR8H2Q8N162 312 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 SPICQ8N5J4 248 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 OR8B3Q8NGG8 313 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 MRPL30Q8TCC3 161 aaKnown RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 MRGPRDQ8TDS7 321 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 NEIL1Q96FI4 390 aaPredicted RBP6.9□□□□□ -1.3
GPC3-203ENST00000406757 OR8B2Q96RD0 313 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 BEX2Q9BXY8 128 aa6.9□□□□□ -1.3
GPC3-203ENST00000406757 SPACA1Q9HBV2 294 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms