RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 CCDC144NLQ6NUI1 221 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 ZFP41Q8N8Y5 198 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 SUMF2Q8NBJ7 301 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 ZNF485Q8NCK3 441 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 MRGPRDQ8TDS7 321 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 CAPSLQ8WWF8 208 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 LEAP2Q969E1 77 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 PGLYRP3Q96LB9 341 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 RBM14Q96PK6 669 aaKnown RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 DPCDQ9BVM2 203 aaPredicted RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 BARHL1Q9BZE3 327 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 METTL9Q9H1A3 318 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 C8orf4Q9NR00 106 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 IDI2-AS1Q9NZ38 188 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
TPM1-207ENST00000403994 AMMECR1Q9Y4X0 333 aaPredicted RBP12.27□□□□□ -0.45
TPM1-207ENST00000403994 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 NPIPB11E5RHQ5 1161 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 OR7C1O76099 320 aaPredicted RBP12.26□□□□□ -0.45
TPM1-207ENST00000403994 IGHV3-7P01780 117 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 AMY1AP04745 511 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 AMY2AP04746 511 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 GNAO1P09471 354 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 SERPINA2P20848 420 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 RPS11P62280 158 aaKnown RBP eCLIP12.26□□□□□ -0.45
TPM1-207ENST00000403994 ABCA11PQ4W5N1 156 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 LINC00596Q86U02 117 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 OSR2Q8N2R0 312 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 ZNF565Q8N9K5 539 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 GHSRQ92847 366 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 RPEQ96AT9 228 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 R3HDM4Q96D70 268 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 TMEM80Q96HE8 168 aa12.26□□□□□ -0.45
TPM1-207ENST00000403994 ZNF184Q99676 751 aaPredicted RBP12.26□□□□□ -0.45
TPM1-207ENST00000403994 TRAV39A0A0B4J263 110 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 A0A1W2PPI3 338 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 SH2D7A6NKC9 451 aaPredicted RBP12.25□□□□□ -0.45
TPM1-207ENST00000403994 J3QR06 171 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 GEMIN2O14893 280 aaKnown RBP12.25□□□□□ -0.45
TPM1-207ENST00000403994 LPLP06858 475 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 C21orf33P30042 268 aaPredicted RBP12.25□□□□□ -0.45
TPM1-207ENST00000403994 MNDAP41218 407 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 GNG10P50151 68 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 ST3GAL4Q11206 333 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 MED21Q13503 144 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 LTC4SQ16873 150 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 Q499Y3 187 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 YIF1BQ5BJH7 314 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 DHRSXQ8N5I4 330 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 OR4F17Q8NGA8 305 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 OR56B4Q8NH76 319 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 RFESDQ8TAC1 157 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 GGHQ92820 318 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 OR14A2Q96R54 314 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 OR4F4Q96R69 305 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 PCDHB16Q9NRJ7 776 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 CKLFQ9UBR5 152 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 ING4Q9UNL4 249 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 PSG11Q9UQ72 335 aa12.25□□□□□ -0.45
TPM1-207ENST00000403994 TRBV5-7A0A0A0MS05 114 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 PNMA8CA0A1B0GUJ8 204 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 A0A1W2PP11 408 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 A0A1W2PRX2 142 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 TMEM30CPA0ZSE6 113 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 XPNPEP2O43895 674 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 CSTBP04080 98 aaKnown RBP12.24□□□□□ -0.45
TPM1-207ENST00000403994 CD83Q01151 205 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 EMX1Q04741 257 aaPredicted RBP12.24□□□□□ -0.45
TPM1-207ENST00000403994 MADCAM1Q13477 382 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 DOC2BQ14184 412 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 MPV17LQ2QL34 196 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 SLC22A6Q4U2R8 563 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 TCTEX1D4Q5JR98 221 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 LAIR2Q6ISS4 152 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 OR5AU1Q8NGC0 362 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 OR10A7Q8NGE5 316 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 S100A13Q99584 98 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 PAK1IP1Q9NWT1 392 aaPredicted RBP12.24□□□□□ -0.45
TPM1-207ENST00000403994 CHCHD3Q9NX63 227 aaKnown RBP12.24□□□□□ -0.45
TPM1-207ENST00000403994 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.24□□□□□ -0.45
TPM1-207ENST00000403994 MOB4Q9Y3A3 225 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 HSPE1-MOB4S4R3N1 261 aa12.24□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A18PA6NE21 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A16PA6NEW6 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 EFCAB10A6NFE3 127 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A20PA6NIJ5 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A9PA6NNJ1 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A12PA8MX19 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A5PA8MXJ8 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 M0QZK8 103 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 ZNF780AO75290 641 aaPredicted RBP12.23□□□□□ -0.45
TPM1-207ENST00000403994 GPX5O75715 221 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A15PP0C7V4 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A13PP0C7W8 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A14PP0C7W9 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 FAM90A24PP0C7X0 464 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 CAPGP40121 348 aa12.23□□□□□ -0.45
TPM1-207ENST00000403994 TAS2R43P59537 309 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms