RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FAM90A1Q86YD7 464 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 BOLLQ8N9W6 283 aaKnown RBP21.52■■□□□ 1.04
CPNE1-205ENST00000401607 CASTOR1Q8WTX7 329 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 C14orf166Q9Y224 244 aaKnown RBP21.52■■□□□ 1.04
CPNE1-205ENST00000401607 WIPI2Q9Y4P8 454 aa21.52■■□□□ 1.04
CPNE1-205ENST00000401607 TRAV39A0A0B4J263 110 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 SFT2D2O95562 160 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 CD55P08174 381 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 SERPINF1P36955 418 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 FXYD4P59646 89 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 SEC61A1P61619 476 aaKnown RBP21.51■■□□□ 1.03
CPNE1-205ENST00000401607 MOB1BQ7L9L4 216 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 TOMM40LQ969M1 308 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 FAM172BPA6NC97 362 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 VSTM5A8MXK1 200 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 BET1O15155 118 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 PLAUP00749 431 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 PPYP01298 95 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 ZNF728P0DKX0 622 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 GNLYP22749 145 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 OR3A1P47881 315 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 LY6G6FQ5SQ64 297 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 LIN54Q6MZP7 749 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 CLEC18BQ6UXF7 455 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 OR4A4PQ8NGN8 299 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 OR2T35Q8NGX2 323 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 DIRC2Q96SL1 478 aa21.51■■□□□ 1.03
CPNE1-205ENST00000401607 MBNL3Q9NUK0 354 aaKnown RBP21.51■■□□□ 1.03
CPNE1-205ENST00000401607 IGKV1D-17A0A075B6S4 117 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 TUBAL3A6NHL2 446 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 CTXN2P0C2S0 81 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 PRDX2P32119 198 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 UCP3P55916 312 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 TLE1Q04724 770 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 Q5BKY6 102 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 BEX5Q5H9J7 111 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 OR11H4Q8NGC9 324 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 ZFAND1Q8TCF1 268 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 Q8TCH9 128 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 HYLS1Q96M11 299 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 PHB2Q99623 299 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 CABLES2Q9BTV7 478 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 SEBOXQ9HB31 216 aaPredicted RBP21.5■■□□□ 1.03
CPNE1-205ENST00000401607 RNF7Q9UBF6 113 aa21.5■■□□□ 1.03
CPNE1-205ENST00000401607 IGHV3OR15-7A0A075B7D8 119 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 M0R233 179 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 TK1P04183 234 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 C4orf17Q53FE4 359 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 C11orf88Q6PI97 169 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 ZCCHC24Q8N2G6 241 aaKnown RBP21.49■■□□□ 1.03
CPNE1-205ENST00000401607 ERGIC1Q969X5 290 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 COQ2Q96H96 371 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 RANBP3Q9H6Z4 567 aaPredicted RBP21.49■■□□□ 1.03
CPNE1-205ENST00000401607 DNAJB11Q9UBS4 358 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 TRAPPC2LQ9UL33 140 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 RNF115Q9Y4L5 304 aa21.49■■□□□ 1.03
CPNE1-205ENST00000401607 TMEM30CPA0ZSE6 113 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 TUSC2O75896 110 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 RAP2BP61225 183 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 HERV-K104P61576 105 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 SLC9A3R2Q15599 337 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 FAM201AQ5SY85 155 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 SLC35E4Q6ICL7 350 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 GALNT11Q8NCW6 608 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 OR5M8Q8NGP6 311 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 SHARPINQ9H0F6 387 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 OPN4Q9UHM6 478 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 BOLA1Q9Y3E2 137 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 DNASE1P24855 282 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 LOXP28300 417 aaPredicted RBP21.48■■□□□ 1.03
CPNE1-205ENST00000401607 CD80P33681 288 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 KCNJ3P48549 501 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 CCL8P80075 99 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 PLSCR3Q9NRY6 295 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 MGAT4AQ9UM21 535 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 PCDHB10Q9UN67 800 aa21.48■■□□□ 1.03
CPNE1-205ENST00000401607 RELNP78509 3460 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 TRBV6-7A0A0A0MS04 114 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 DBX1A6NMT0 343 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 ZNF737O75373 536 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 HLA-GP17693 338 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 AESQ08117 197 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 HMGN3Q15651 99 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 TGIF2LYQ8IUE0 185 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 LILRB1Q8NHL6 650 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-205ENST00000401607 FAM222BQ8WU58 562 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 KIRREL1Q96J84 757 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 CLEC4MQ9H2X3 399 aaPredicted RBP21.47■■□□□ 1.03
CPNE1-205ENST00000401607 ADGRG4Q8IZF6 3080 aa21.47■■□□□ 1.03
CPNE1-205ENST00000401607 DEFB108AA8MXU0 73 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 CCSO14618 274 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 CYB5R3P00387 301 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-205ENST00000401607 APOBEC3AP31941 199 aaPredicted RBP21.46■■□□□ 1.03
CPNE1-205ENST00000401607 MST1LQ2TV78 715 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 LAMTOR1Q6IAA8 161 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 SLC38A6Q8IZM9 456 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 ASCC1Q8N9N2 400 aaKnown RBP21.46■■□□□ 1.03
CPNE1-205ENST00000401607 RSRP1Q9BUV0 290 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 PRR13Q9NZ81 148 aa21.46■■□□□ 1.03
CPNE1-205ENST00000401607 KIF25Q9UIL4 384 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms