RNA–Protein interactions for RNA: ENST00000399617.5

CACNA1C-211, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,482 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-211ENST00000399617 PPP1R32Q7Z5V6 425 aa12.04□□□□□ -0.48
CACNA1C-211ENST00000399617 LOC102724200A0A096LPH7 203 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 TRAT1Q6PIZ9 186 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 TMEM229BQ8NBD8 167 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 BVESQ8NE79 360 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 FGF20Q9NP95 211 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 TMEM140Q9NV12 185 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 TRDCB7Z8K6 153 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 RHBDL1O75783 438 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 FAM106CPP0CH98 169 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 GABRB1P18505 474 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 C16orf82Q7Z2V1 217 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 OR5C1Q8NGR4 320 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 OR4X1Q8NH49 305 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 SCARF2Q96GP6 870 aaPredicted RBP12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 NTN4Q9HB63 628 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 THSD7AQ9UPZ6 1657 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 KRTDAPP60985 99 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 BAK1Q16611 211 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 FRRS1LQ9P0K9 344 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 WASHC3Q9Y3C0 194 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 KPTNQ9Y664 436 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 FBP1P09467 338 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 A0A1W2PQD3 144 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 RFPL3SP0C7P2 107 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 CXorf58Q96LI9 332 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 UCK1Q9HA47 277 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 PPP5D1E7EU14 171 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 PTBP3O95758 552 aaKnown RBP12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 TEX30Q5JUR7 227 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 C12orf73Q69YU5 71 aa12.03□□□□□ -0.48
CACNA1C-211ENST00000399617 IGKV1-8A0A0C4DH67 115 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF207O43670 478 aaKnown RBP12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 UBE2L3P68036 154 aaKnown RBP12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 CEBPEQ15744 281 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 NCR3LG1Q68D85 454 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 PNKDQ8N490 385 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 OR4C12Q96R67 309 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 WSB1Q9Y6I7 421 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 RPL7P18124 248 aaKnown RBP12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 NUBP1P53384 320 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 ZNF596Q8TC21 504 aa12.02□□□□□ -0.48
CACNA1C-211ENST00000399617 RD3LP0DJH9 198 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 GNLYP22749 145 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 OR4P4Q8NGL7 312 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 GPHA2Q96T91 129 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 KNL1Q8NG31 2342 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 HMGCLL1Q8TB92 370 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 SPNP16150 400 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 SPACA3Q8IXA5 215 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 MRGPRFQ96AM1 343 aa12.02□□□□□ -0.49
CACNA1C-211ENST00000399617 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 CHST1O43916 411 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 JTBO76095 146 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 NPY1RP25929 384 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 TCTE3Q8IZS6 198 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 SLC52A3Q9NQ40 469 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 OR51B2Q9Y5P1 312 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 IGHV1-69-2A0A0G2JMI3 117 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 A0A0G2JMM0 328 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 A0A1W2PPB8 328 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 A0A1W2PRS3 328 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 KIR3DP1A8MWS1 328 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 MBP02144 154 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 ZNF154Q13106 437 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 RASL12Q9NYN1 266 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 COL11A2P13942 1736 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 ZIC3O60481 467 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 PSG2P11465 335 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 DYNLT3P51808 116 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 RPL30P62888 115 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 PPP1R1AQ13522 171 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 C5orf17Q8NAS9 161 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 DNASE2BQ8WZ79 361 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 WDR61Q9GZS3 305 aaKnown RBP12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 C1orf174Q8IYL3 243 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 LILRB4Q8NHJ6 448 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 ZNF701M0R085 212 aaPredicted RBP12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 SYNGR1O43759 233 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 PDPNQ86YL7 162 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 WDR34Q96EX3 536 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 C16orf92Q96LL3 132 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 GHITMQ9H3K2 345 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 DEFB121Q5J5C9 76 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
CACNA1C-211ENST00000399617 FXYD1O00168 92 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 CTAG2O75638 210 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 MMP15P51511 669 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 TM4SF20Q53R12 229 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 BTF3L4Q96K17 158 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 GSTZ1O43708 216 aaPredicted RBP12□□□□□ -0.49
CACNA1C-211ENST00000399617 THY1P04216 161 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 EVX1P49640 407 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 PSG5Q15238 335 aa12□□□□□ -0.49
CACNA1C-211ENST00000399617 CES1P1Q9UKY3 287 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms