RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 MAGEA13PA6NCF6 341 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 OOSP1A8MZH6 123 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 NPIPB11E5RHQ5 1161 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 H3BUI4 141 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 TOR1AO14656 332 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 GEMIN2O14893 280 aaKnown RBP11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 IL1AP01583 271 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 CDK1P06493 297 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 GTF2F2P13984 249 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 JUNBP17275 347 aaPredicted RBP11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 SERPINA2P20848 420 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 MAPK3P27361 379 aaPredicted RBP11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 BRS3P32247 399 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 PRRX1P54821 245 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 DOC2BQ14184 412 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 C6orf141Q5SZD1 244 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 C16orf82Q7Z2V1 217 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 KLHDC1Q8N7A1 406 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 SUMF2Q8NBJ7 301 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 OR10A7Q8NGE5 316 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 OR9G1Q8NH87 305 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 CFHR4Q92496 578 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 MRPS24Q96EL2 167 aaKnown RBP11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 DPCDQ9BVM2 203 aaPredicted RBP11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 MND1Q9BWT6 205 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 PRSS22Q9GZN4 317 aa11.95□□□□□ -0.5
SMIM11A-203ENST00000399299 BUB1B-PAK6H3BSN5 160 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 SLC22A6Q4U2R8 563 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 SLC16A12Q6ZSM3 486 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 LYPD6Q86Y78 171 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 NKAIN3Q8N8D7 197 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 NRG4Q8WWG1 115 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 MYDGFQ969H8 173 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 MMP28Q9H239 520 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 SERTAD4Q9NUC0 356 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 IDI2-AS1Q9NZ38 188 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 ZNF581Q9P0T4 197 aa11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 MRPS28Q9Y2Q9 187 aaKnown RBP11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 AMMECR1Q9Y4X0 333 aaPredicted RBP11.94□□□□□ -0.5
SMIM11A-203ENST00000399299 CMYA5Q8N3K9 4069 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 A0A1W2PP11 408 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 TMEM30CPA0ZSE6 113 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 LY6LH3BQJ8 138 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 PIN1P1O15428 100 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 NFYBP25208 207 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 AQP4P55087 323 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 TPTE2P1Q5T6R2 138 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 CCDC144NLQ6NUI1 221 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 JAGN1Q8N5M9 183 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 MS4A15Q8N5U1 240 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 MRGPRDQ8TDS7 321 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 MUL1Q969V5 352 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 AKR1E2Q96JD6 320 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 LIN7BQ9HAP6 207 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 SPACA1Q9HBV2 294 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 SCN3BQ9NY72 215 aa11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 RCC2Q9P258 522 aaKnown RBP11.93□□□□□ -0.5
SMIM11A-203ENST00000399299 A0A1W2PPK0 400 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 J3QR06 171 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 TSPAN15O95858 294 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 MAS1P04201 325 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 VSIG10L2P0DP72 767 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 GZMHP20718 246 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 MNDAP41218 407 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 GABPB1Q06547 395 aaPredicted RBP11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 AWAT2Q6E213 333 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 GLIPR1L1Q6UWM5 242 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 UNQ9370/PRO34162Q6UXP9 181 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 WIPF2Q8TF74 440 aaPredicted RBP11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 UQCC2Q9BRT2 126 aa11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 LSM2Q9Y333 95 aaKnown RBP11.92□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A10PA6NDY2 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A18PA6NE21 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A16PA6NEW6 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A20PA6NIJ5 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A7PA6NKC0 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A12PA8MX19 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A5PA8MXJ8 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A23PA8MXZ1 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 PTGES3LE9PB15 166 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 CSF1P09603 554 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A15PP0C7V4 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A13PP0C7W8 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A14PP0C7W9 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 FAM90A24PP0C7X0 464 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 MYF6P23409 242 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 SSTR5P35346 364 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 SLC35A2P78381 396 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 RBM39Q14498 530 aaKnown RBP11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 HABP2Q14520 560 aaPredicted RBP11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 SPHARQ15513 63 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 UTF1Q5T230 341 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 ATAD3CQ5T2N8 411 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 OR52M1Q8NGK5 317 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 ANKRD60Q9BZ19 345 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 WNT10AQ9GZT5 417 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 GHRLQ9UBU3 117 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 PSG11Q9UQ72 335 aa11.91□□□□□ -0.5
SMIM11A-203ENST00000399299 TPRKBQ9Y3C4 175 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 320.7 ms