RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 MT-ND4P03905 459 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 GDNFP39905 211 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 FAM120AOSQ5T036 256 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SLC35E4Q6ICL7 350 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 HCP5Q6MZN7 132 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 BTNL3Q6UXE8 466 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 OR56B1Q8NGI3 324 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 OR10R2Q8NGX6 335 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CORO2AQ92828 525 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TNFRSF14Q92956 283 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 UPRTQ96BW1 309 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 WDFY2Q96P53 400 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 HDHD3Q9BSH5 251 aaPredicted RBP10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 PECRQ9BY49 303 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 NCOR1P1Q9H4R4 102 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ETAA1Q9NY74 926 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ONECUT1Q9UBC0 465 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 HSF4Q9ULV5 492 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 KPTNQ9Y664 436 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 AUP1Q9Y679 476 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 LINC00312Q9Y6C7 94 aa10.18□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MEIKINA0A087WXM9 373 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 hADV38S2A0JD32 116 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 C17orf98A8MV24 154 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 M0R1W7 72 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 NAPSAO96009 420 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RANBP1P43487 201 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RORCP51449 518 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 C17orf58Q2M2W7 97 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 UTF1Q5T230 341 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 BAIAP2L2Q6UXY1 529 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 VMO1Q7Z5L0 202 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 C5orf24Q7Z6I8 188 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CMTM4Q8IZR5 234 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MRPL30Q8TCC3 161 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 NEDD4LQ96PU5 975 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 PCGF1Q9BSM1 259 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SLIRPQ9GZT3 109 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ATG5Q9H1Y0 275 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ABCG5Q9H222 651 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 UNKLQ9H9P5 680 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZMAT3Q9HA38 289 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CCDC59Q9P031 241 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 LPAR3Q9UBY5 353 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RSL24D1Q9UHA3 163 aaKnown RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 AK3Q9UIJ7 227 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ELF5Q9UKW6 265 aaPredicted RBP10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MXRA5Q9NR99 2828 aa10.17□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SMIM31A0A1B0GVY4 71 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TMEM30CPA0ZSE6 113 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF701M0R085 212 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TOX4O94842 621 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 EIF4EP06730 217 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF728P0DKX0 622 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 IGHV4-38-2P0DP08 117 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 HIST1H1DP16402 221 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 GNB3P16520 340 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF182P17025 639 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 HOXB4P17483 251 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SSTR5P35346 364 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 GLP1RP43220 463 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 KLRD1Q13241 179 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 DYNC1I2Q13409 638 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RBM39Q14498 530 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 METTL11BQ5VVY1 283 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 C1orf122Q6ZSJ8 110 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 Q6ZTK2 550 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SAMD12Q8N8I0 201 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 OR4K15Q8NH41 348 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MRGPRDQ8TDS7 321 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 NEK7Q8TDX7 302 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RAB3CQ96E17 227 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF714Q96N38 554 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MIXL1Q9H2W2 232 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 SIRT7Q9NRC8 400 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 MBNL3Q9NUK0 354 aaKnown RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 PLEKHJ1Q9NW61 149 aa10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 UBE2J1Q9Y385 318 aaPredicted RBP10.16□□□□□ -0.78
HLA-DQB1-203ENST00000399082 IGHV3OR16-10A0A075B7F0 116 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TRGV10A0A0A0MS01 117 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 TRAV40A0A0B4J280 105 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 FUOMA2VDF0 154 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 METTL21EPA6NDL7 271 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CCDC160A6NGH7 325 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RNASEK-C17orf49H0YIS7 233 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 C15orf65H3BRN8 121 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 H3BUI4 141 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 NOL3O60936 208 aaKnown RBP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CA11O75493 328 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 RCC1P18754 421 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 PRTN3P24158 256 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF260Q3ZCT1 412 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 UBE2NLQ5JXB2 153 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 PRAMEF5Q5TYX0 476 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 FAM53AQ6NSI3 398 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF880Q6PDB4 577 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 ZNF782Q6ZMW2 699 aaPredicted RBP10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 DTX3Q8N9I9 347 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 CCDC107Q8WV48 283 aa10.15□□□□□ -0.78
HLA-DQB1-203ENST00000399082 LINC00574Q9H8X3 128 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms