RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RASL10BQ96S79 203 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 DMRTA2Q96SC8 542 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 PCED1AQ9H1Q7 454 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 WNT16Q9UBV4 365 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 ARL2-SNX15V9GYD0 113 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 CACNA1GO43497 2377 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 CCL4P13236 92 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 FUT3P21217 361 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 PYY3Q5JQD4 70 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 SLC35E3Q7Z769 313 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 POC1AQ8NBT0 407 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 ZNF665Q9H7R5 613 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 TUBA4BQ9H853 241 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 OBP2BQ9NPH6 170 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 FCN1O00602 326 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 RAMP1O60894 148 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 IGHEP01854 428 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 FSTP19883 344 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 OR3A1P47881 315 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 C16orf82Q7Z2V1 217 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 OR5AS1Q8N127 324 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 FAM234AQ9H0X4 552 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 DCAF16Q9NXF7 216 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 TTRP02766 147 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 LINC00271P0C7V0 271 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 CD46P15529 392 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 COL5A1-AS1Q5SY13 56 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 ZNF468Q5VIY5 522 aaPredicted RBP12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 SPNS3Q6ZMD2 512 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 NAT8BQ9UHF3 227 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 DOCK8Q8NF50 2099 aa12.78□□□□□ -0.36
RPRD1A-202ENST00000399022 PCNTO95613 3336 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 IL2RAP01589 272 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 GCNT2Q8N0V5 402 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 PCGF1Q9BSM1 259 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 BET1LQ9NYM9 111 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 MTCH1Q9NZJ7 389 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 LOXL2Q9Y4K0 774 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 KIF26BQ2KJY2 2108 aa12.77□□□□□ -0.36
RPRD1A-202ENST00000399022 DOCK9Q9BZ29 2069 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 IGKV1D-42A0A075B6H8 117 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 CBR3O75828 277 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 HSPB1P04792 205 aaKnown RBP12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 SLC25A6P12236 298 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 PTGER4P35408 488 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 LHFPL2Q6ZUX7 228 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 ASB10Q8WXI3 467 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 RAB40CQ96S21 281 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF552Q9H707 407 aaPredicted RBP12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 TMEM252Q8N6L7 170 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 CACNG5Q9UF02 275 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 TIMM10BQ9Y5J6 103 aa12.77□□□□□ -0.37
RPRD1A-202ENST00000399022 A0A1W2PQD3 144 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 SELENOVP59797 346 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 DEFB127Q9H1M4 99 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 NAGKQ9UJ70 344 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 LIPT2A6NK58 231 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 PATE3B3GLJ2 98 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 E9PQ18 207 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 MPPED1O15442 326 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 DHRS3O75911 302 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 FOLR2P14207 255 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 AGAP20933 346 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 GLIPR1P48060 266 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 CNN1P51911 297 aaKnown RBP12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 FFAR4Q5NUL3 377 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 DMRTA1Q5VZB9 504 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 TCTEX1D1Q8N7M0 179 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 OR11L1Q8NGX0 322 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 Q8WTZ3 238 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 APH1AQ96BI3 265 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 NEIL1Q96FI4 390 aaPredicted RBP12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 CIB3Q96Q77 187 aaPredicted RBP12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 C5orf49A4QMS7 147 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 F8VVB4 439 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 F8VWA3 439 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 BCL2P10415 239 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 ZNF17P17021 662 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 SPINK2P20155 84 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 SLC38A11Q08AI6 406 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 TIGITQ495A1 244 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 H2BFWTQ7Z2G1 175 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 MRGPRGQ86SM5 289 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 RPH3ALQ9UNE2 315 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 COL4A6Q14031 1691 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 TRAF3IP2O43734 574 aaPredicted RBP12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 ERVFC1-1P60608 527 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 TBC1D26Q86UD7 250 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 OR5AU1Q8NGC0 362 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 RNF133Q8WVZ7 376 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 STARD4Q96DR4 205 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 RNF24Q9Y225 148 aa12.76□□□□□ -0.37
RPRD1A-202ENST00000399022 CDS2O95674 445 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 VDAC1P21796 283 aa12.75□□□□□ -0.37
RPRD1A-202ENST00000399022 GFI1BQ5VTD9 330 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms