RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 SLC35G3Q8N808 338 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 CHST4Q8NCG5 386 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 OR2Y1Q8NGV0 311 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 SAP25Q8TEE9 199 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 BAALCQ8WXS3 180 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 DCUN1D4Q92564 292 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF681Q96N22 645 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 NRTNQ99748 197 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 MAP1LC3BQ9GZQ8 125 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 GTSF1LQ9H1H1 148 aa5.73□□□□□ -1.49
TM9SF4-202ENST00000398022 IGKV1-8A0A0C4DH67 115 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 A0A0G2JK05 382 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 A0A1W2PPK0 400 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 GABARAPH6UMI1 98 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 HSD17B6O14756 317 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 ZGLP1P0C6A0 271 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 HIST1H1CP16403 213 aaKnown RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 RHOBP62745 196 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 KLF9Q13886 244 aaPredicted RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 CDK5R1Q15078 307 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 DUSP5Q16690 384 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 TP53I3Q53FA7 332 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 TMEM196Q5HYL7 178 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 DCST2Q5T1A1 773 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 MRGPRGQ86SM5 289 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 TCTEX1D1Q8N7M0 179 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 BMPERQ8N8U9 685 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR5AN1Q8NGI8 311 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR5A2Q8NGI9 324 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 PFN4Q8NHR9 129 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 C10orf35Q96D05 121 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 WDR92Q96MX6 357 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR11A1Q9GZK7 315 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SLC17A5Q9NRA2 495 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 LYRM2Q9NU23 88 aaPredicted RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 CD207Q9UJ71 328 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SIGLEC7Q9Y286 467 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SIGLEC9Q9Y336 463 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 PRSS38A1L453 326 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SLC16A7O60669 478 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SEMA4FO95754 770 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 HLA-AP01891 365 aaKnown RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 TFPIP10646 304 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 NTHL1P78549 312 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 AGERQ15109 404 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 LY6G6FQ5SQ64 297 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 RTL6Q6ICC9 239 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 RPTNQ6XPR3 784 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 SLC35F2Q8IXU6 374 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR2L13Q8N349 312 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 NOXO1Q8NFA2 376 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 MSI2Q96DH6 328 aaKnown RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 CTDSP1Q9GZU7 261 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 NTMQ9P121 344 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 TRAV27A0A087WT01 109 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 B5MCH6 92 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 CPMP14384 443 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF136P52737 540 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 CLRN1P58418 232 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 RUNX1Q01196 453 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF85Q03923 595 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 MLF2Q15773 248 aaPredicted RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR52E2Q8NGJ4 325 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 LOXL4Q96JB6 756 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 PGLYRP3Q96LB9 341 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 PRSS27Q9BQR3 290 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 AICDAQ9GZX7 198 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 FNDC4Q9H6D8 234 aaPredicted RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 COMMD9Q9P000 198 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 OR1A2Q9Y585 309 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 WSB1Q9Y6I7 421 aa5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 MDC1Q14676 2089 aaKnown RBP5.72□□□□□ -1.49
TM9SF4-202ENST00000398022 LRRK1Q38SD2 2015 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 NDUFB2O95178 105 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 WNT1P04628 370 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 CD1AP06126 327 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 TACSTD2P09758 323 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 IGFBP2P18065 325 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 KIR2DL2P43627 348 aaPredicted RBP5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 CLDN2P57739 230 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 ID3Q02535 119 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 P2RY6Q15077 328 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 PDGFRLQ15198 375 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 DTWD2Q8NBA8 298 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 NPEPL1Q8NDH3 523 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 ZNF439Q8NDP4 499 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 FGGYQ96C11 551 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 ZMYND19Q96E35 227 aaPredicted RBP5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 OR6C1Q96RD1 312 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 MYADMQ96S97 322 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 GINS3Q9BRX5 216 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 ADAT1Q9BUB4 502 aaKnown RBP5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 SMIM3Q9BZL3 60 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 SELENOIQ9C0D9 397 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 NOX3Q9HBY0 568 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 C20orf141Q9NUB4 165 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 PEMTQ9UBM1 199 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 B4GALT7Q9UBV7 327 aa5.71□□□□□ -1.49
TM9SF4-202ENST00000398022 RELNP78509 3460 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms