RNA–Protein interactions for RNA: ENST00000397876.6

SNRNP25-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

TSL 3

Gene SNRNP25, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-203ENST00000397876 PAX5Q02548 391 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 LTC4SQ16873 150 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 RSBN1Q5VWQ0 802 aaPredicted RBP11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 OR8H3Q8N146 312 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 DRAM1Q8N682 238 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 OR10A7Q8NGE5 316 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 OR51D1Q8NGF3 324 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 OR51A2Q8NGJ7 313 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 RHOXF1Q8NHV9 184 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 MRGPRDQ8TDS7 321 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 DPF1Q92782 380 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 ZNF649Q9BS31 505 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 C9orf16Q9BUW7 83 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 JAM3Q9BX67 310 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 GPR61Q9BZJ8 451 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 LINC00574Q9H8X3 128 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 PSG11Q9UQ72 335 aa11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 RPL36Q9Y3U8 105 aaKnown RBP11.34□□□□□ -0.59
SNRNP25-203ENST00000397876 NPIPB11E5RHQ5 1161 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 FGF16O43320 207 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 HTR3BO95264 441 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 PIGYQ3MUY2 71 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 KLHL22Q53GT1 634 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF529Q6P280 563 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 SLC16A12Q6ZSM3 486 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 C5orf56Q8N8D9 126 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 LINC00482Q8N8I6 264 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 OR52I1Q8NGK6 324 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 OR10K1Q8NGX5 313 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 OR10X1Q8NGY0 326 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 RFESDQ8TAC1 157 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 PLPPR1Q8TBJ4 325 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 GPR148Q8TDV2 347 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 CHPT1Q8WUD6 406 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 TAS2R4Q9NYW5 299 aa11.33□□□□□ -0.6
SNRNP25-203ENST00000397876 SERPINE3A8MV23 424 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 K7EIL1 84 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 SSTR5P35346 364 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 RPL23AP62750 156 aaKnown RBP11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 PPP3R1P63098 170 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 C10orf67Q8IYJ2 551 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 Q8NFD4 153 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 RGP1Q92546 391 aaPredicted RBP11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 DPCDQ9BVM2 203 aaPredicted RBP11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 MRPS18AQ9NVS2 196 aaKnown RBP11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
SNRNP25-203ENST00000397876 LOC100130705A0A1B0GUX0 176 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 NUDT19A8MXV4 375 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 HSD17B6O14756 317 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 IGKV1D-33P01593 117 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 IGKV1-33P01594 117 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 CSTBP04080 98 aaKnown RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 LIMS3P0CW19 117 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 LIMS4P0CW20 117 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 SLC6A1P30531 599 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 GTF2A1P52655 376 aaPredicted RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 RBM11P57052 281 aaKnown RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 SLC35B1P78383 322 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 DIAPH2-AS1Q14236 149 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 HNF4GQ14541 408 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 CCDC58Q4VC31 144 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 DDI2Q5TDH0 399 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 ASCL4Q6XD76 172 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 FOXRED2Q8IWF2 684 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 SUMF2Q8NBJ7 301 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 NOL4LQ96MY1 436 aaPredicted RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 S100A13Q99584 98 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 IFT22Q9H7X7 185 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 TMEM138Q9NPI0 162 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 PAK1IP1Q9NWT1 392 aaPredicted RBP11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 IL36GQ9NZH8 169 aa11.31□□□□□ -0.6
SNRNP25-203ENST00000397876 TRAV39A0A0B4J263 110 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 TMEM30CPA0ZSE6 113 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 CCRL2O00421 344 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 CDRT1O95170 752 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 HOXD3P31249 432 aaPredicted RBP11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF93P35789 620 aaPredicted RBP11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 THBS3P49746 956 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 EGFEM1PQ0D2K5 195 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 ZNF816Q0VGE8 651 aaPredicted RBP11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 DEFB121Q5J5C9 76 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 TMPRSS11AQ6ZMR5 421 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 ETV3LQ6ZN32 361 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 OR2W3Q7Z3T1 314 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 MRPL41Q8IXM3 137 aaKnown RBP11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 COMMD1Q8N668 190 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 OR52N1Q8NH53 320 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 MCRIP2Q9BUT9 160 aaKnown RBP11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
SNRNP25-203ENST00000397876 ING4Q9UNL4 249 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms