RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 LPAR3Q9UBY5 353 aa19.5■□□□□ 0.71
TSPAN4-203ENST00000397397 POLR3KQ9Y2Y1 108 aaPredicted RBP19.5■□□□□ 0.71
TSPAN4-203ENST00000397397 ABCA2Q9BZC7 2435 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 DSCAML1Q8TD84 2053 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 MED13LQ71F56 2210 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 hADV38S2A0JD32 116 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 MEX3AA1L020 520 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 PNLIPRP3Q17RR3 467 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 HACD4Q5VWC8 232 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 OR4K15Q8NH41 348 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 C8orf46Q8TAG6 207 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 CCDC107Q8WV48 283 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 MSI2Q96DH6 328 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 NCOR1P1Q9H4R4 102 aa19.49■□□□□ 0.71
TSPAN4-203ENST00000397397 PPIAL4CA0A0B4J2A2 164 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 ENSAO43768 121 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 PPIAL4GP0DN37 164 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 PTHLHP12272 177 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 GNG2P59768 71 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 TMEM200BQ69YZ2 307 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 CYB5R2Q6BCY4 276 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 TRAPPC6BQ86SZ2 158 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 GAPTQ8N292 157 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 LY6G5BQ8NDX9 201 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 MRPL30Q8TCC3 161 aaKnown RBP19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 RIMS4Q9H426 269 aaPredicted RBP19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 MMP26Q9NRE1 261 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 TRAPPC2LQ9UL33 140 aa19.48■□□□□ 0.71
TSPAN4-203ENST00000397397 TRGV10A0A0A0MS01 117 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 TRAV39A0A0B4J263 110 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 IGHV2-70DA0A0C4DH43 119 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 HLA-DQB1P01920 261 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 CD99P14209 185 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 GLP1RP43220 463 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 PAX2Q02962 417 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 ZNF273Q14593 569 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 BAIAP2L2Q6UXY1 529 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 SNX29P2Q8IUI4 249 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 SETD6Q8TBK2 473 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 NUDCD2Q8WVJ2 157 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 C12orf4Q9NQ89 552 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 OR6C3Q9NZP0 311 aa19.47■□□□□ 0.71
TSPAN4-203ENST00000397397 TRAV20A0A0B4J274 112 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 NAPSAO96009 420 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 TGFAP01135 160 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 LIPFP07098 398 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 MELTFP08582 738 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 TCF23Q7RTU1 214 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 OR13A1Q8NGR1 328 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 LINC00312Q9Y6C7 94 aa19.46■□□□□ 0.71
TSPAN4-203ENST00000397397 TEP1Q99973 2627 aaKnown RBP19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 A0A0G2JMP0 313 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 A0A0X1KG70 313 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 KIR2DS1A0A191URI9 304 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 FABP12A6NFH5 140 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 PITPNAQ00169 270 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 IL18Q14116 193 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 BTNL3Q6UXE8 466 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 CCDC190Q86UF4 302 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 GLCCI1Q86VQ1 547 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 OR4M2Q8NGB6 313 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 MRGPRDQ8TDS7 321 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 CORO2AQ92828 525 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 GCDHQ92947 438 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 DACT3Q96B18 629 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 TMEM186Q96B77 213 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 C18orf12Q96KH6 178 aa19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 UBE2J1Q9Y385 318 aaPredicted RBP19.45■□□□□ 0.7
TSPAN4-203ENST00000397397 KIAA2026Q5HYC2 2103 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 A0A1W2PPH5 198 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 TPPPO94811 219 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF16P17020 682 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 PRSS3P35030 304 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 FAM131AQ6UXB0 335 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF565Q8N9K5 539 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 HIF1ANQ9NWT6 349 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 ONECUT1Q9UBC0 465 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 RABL2AQ9UBK7 228 aaPredicted RBP19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 RABL2BQ9UNT1 228 aa19.44■□□□□ 0.7
TSPAN4-203ENST00000397397 TRBV6-6A0A0A6YYG2 114 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 SSX5O60225 188 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 CCL3L1P16619 93 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 RCC1P18754 421 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 DVL1P1P54792 670 aaPredicted RBP19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 GUCA2AQ02747 115 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 SPANXN2Q5MJ10 180 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 DCAF12L2Q5VW00 463 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 PYHIN1Q6K0P9 492 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 C15orf40Q8WUR7 153 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF714Q96N38 554 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 ABHD1Q96SE0 405 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 INSIG2Q9Y5U4 225 aa19.43■□□□□ 0.7
TSPAN4-203ENST00000397397 FCGR3AP08637 254 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 INHBBP09529 407 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 ARF6P62330 175 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 C6orf183Q5T699 404 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 ZNF880Q6PDB4 577 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 Q6ZPA2 131 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 MOB1BQ7L9L4 216 aa19.42■□□□□ 0.7
TSPAN4-203ENST00000397397 DMRTB1Q96MA1 342 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms