RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 MEIKINA0A087WXM9 373 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 F5H0A9 414 aaPredicted RBP19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 WNT2P09544 360 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 FAUP35544 74 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 MEF2CQ06413 473 aaPredicted RBP19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 CLEC12BQ2HXU8 276 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 ZNF57Q68EA5 555 aaPredicted RBP19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 ZNF880Q6PDB4 577 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 PRSS57Q6UWY2 283 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 TMEM229BQ8NBD8 167 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 BEST4Q8NFU0 473 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 SETD6Q8TBK2 473 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 ST6GALNAC5Q9BVH7 336 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 Q9N2K0 584 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 MBNL3Q9NUK0 354 aaKnown RBP19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 KCNIP1Q9NZI2 227 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 CLN8Q9UBY8 286 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 KIF25Q9UIL4 384 aa19.58■□□□□ 0.73
TSPAN4-202ENST00000397396 TRBV23-1A0A0A0MS06 115 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 A0A1B0GW55 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 A0A1W2PQ09 198 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 ANKRD20A5PA0PJZ0 165 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 ODAMA1E959 279 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 MEIS3P1A6NDR6 274 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 VWC2LB2RUY7 222 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L2P0CJ85 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L3P0CJ86 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L4P0CJ87 422 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L5P0CJ88 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L6P0CJ89 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L7P0CJ90 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 SELLP14151 372 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 TAS2R46P59540 309 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DEFA1P59665 94 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DEFA3P59666 94 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DYRK1AQ13627 763 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4L9Q6RFH8 374 aaPredicted RBP19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 ZFAND2BQ8WV99 257 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 C7orf50Q9BRJ6 194 aaKnown RBP19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 ING3Q9NXR8 418 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 DUX4Q9UBX2 424 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 SPG11Q96JI7 2443 aa19.57■□□□□ 0.72
TSPAN4-202ENST00000397396 hADV38S2A0JD32 116 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 CENPXA8MT69 81 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 ZNF736B4DX44 427 aaPredicted RBP19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 ESCO2Q56NI9 601 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 GVQW1Q8N7I0 195 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 ZNF565Q8N9K5 539 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 OR4K15Q8NH41 348 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 COX4I2Q96KJ9 171 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 OPN4Q9UHM6 478 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 DCHS2Q6V1P9 2916 aa19.56■□□□□ 0.72
TSPAN4-202ENST00000397396 TRGV10A0A0A0MS01 117 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 LANCL1O43813 399 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 GZMHP20718 246 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 GLIPR1P48060 266 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 ARPC4P59998 168 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 GNB2P62879 340 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 STEAP3Q658P3 488 aa19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 ZNF230Q9UIE0 474 aaPredicted RBP19.55■□□□□ 0.72
TSPAN4-202ENST00000397396 ARID1AO14497 2285 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 A0A1W2PPH5 198 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 TRDCB7Z8K6 153 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 DIRAS3O95661 229 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 IGHV2-5P01817 119 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 AKAIN1P0CW23 69 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 RPL31P62899 125 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 HLA-DRB3P79483 266 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 MEF2DQ14814 521 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 CHRFAM7AQ494W8 412 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 CD276Q5ZPR3 534 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 WDR25Q64LD2 544 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 ZNF841Q6ZN19 808 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 LYSMD2Q8IV50 215 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 H1FXQ92522 213 aaKnown RBP19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 SSBP3Q9BWW4 388 aaPredicted RBP19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 NARFLQ9H6Q4 476 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 ANXA10Q9UJ72 324 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 LINC00312Q9Y6C7 94 aa19.54■□□□□ 0.72
TSPAN4-202ENST00000397396 NAP1L6A6NFF2 107 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 CTXN2P0C2S0 81 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 GLP1RP43220 463 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 KLF9Q13886 244 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 RNASE10Q5GAN6 216 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 STEAP1BQ6NZ63 245 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 OR5AP2Q8NGF4 316 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 OR4A4PQ8NGN8 299 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 OR5H2Q8NGV7 314 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 CLDND2Q8NHS1 167 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 CCDC107Q8WV48 283 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 SNAPC3Q92966 411 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 CYYR1Q96J86 154 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 UBE2J1Q9Y385 318 aaPredicted RBP19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 LRBAP50851 2863 aa19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 ASH1LQ9NR48 2969 aaKnown RBP19.53■□□□□ 0.72
TSPAN4-202ENST00000397396 IGHV4-30-2A0A087WSY4 118 aa19.52■□□□□ 0.72
TSPAN4-202ENST00000397396 FABP7O15540 132 aa19.52■□□□□ 0.72
TSPAN4-202ENST00000397396 CD74P04233 296 aa19.52■□□□□ 0.72
TSPAN4-202ENST00000397396 OR3A3P47888 321 aa19.52■□□□□ 0.72
TSPAN4-202ENST00000397396 HMGN3Q15651 99 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms