RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 PITPNC1Q9UKF7 332 aa7.93□□□□□ -1.14
CAPN3-206ENST00000397163 UNC13CQ8NB66 2214 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ZFP92A6NM28 416 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 C10orf142B7Z368 130 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 OR2J2O76002 312 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 HBE1P02100 147 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 CD38P28907 300 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 SRPXP78539 464 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 TLE4Q04727 773 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 SHBQ15464 509 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 SLC25A24Q6NUK1 477 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF774Q6NX45 483 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 SLC35E3Q7Z769 313 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 NFAM1Q8NET5 270 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 OR13D1Q8NGV5 346 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM37Q8WXS4 190 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 C10orf35Q96D05 121 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 HIST1H2AAQ96QV6 131 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 GLRX2Q9NS18 164 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 CLEC1BQ9P126 229 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 NCOA6Q14686 2063 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ADAMTS9Q9P2N4 1935 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 RALGAPA1Q6GYQ0 2036 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 KIAA2026Q5HYC2 2103 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 IGKV1-27A0A075B6S5 117 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 IGHV1OR21-1A0A087WYE8 117 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 IGHV3-15A0A0B4J1V0 119 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 PROB1E7EW31 1015 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ADAM20O43506 726 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 PPYP01298 95 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 MYF5P13349 255 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 UCP3P55916 312 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 CFHR1Q03591 330 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 DLX2Q07687 328 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 MALLQ13021 153 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 OR5I1Q13606 314 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 CNN3Q15417 329 aaKnown RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF100Q8IYN0 542 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 BATF2Q8N1L9 274 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 OR2M3Q8NG83 312 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 OR5L2Q8NGL0 311 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 CLDND2Q8NHS1 167 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 HLA-CQ95604 372 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 RBMXL1Q96E39 390 aaKnown RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ADGRG7Q96K78 797 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 LYRM2Q9NU23 88 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 ST3GAL6Q9Y274 331 aa7.92□□□□□ -1.14
CAPN3-206ENST00000397163 MRPS18CQ9Y3D5 142 aaKnown RBP7.92□□□□□ -1.14
CAPN3-206ENST00000397163 DUX1O43812 170 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 S100A7P31151 101 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 PLA2G5P39877 138 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 PTGDSP41222 190 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 CD81P60033 236 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 PRAMEF20Q5VT98 475 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 C17orf82Q86X59 251 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 OSR2Q8N2R0 312 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF385AQ96PM9 386 aaKnown RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 GPHA2Q96T91 129 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 SPOCK3Q9BQ16 436 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 UBE2ZQ9H832 354 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 PLA2G3Q9NZ20 509 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 LAMP3Q9UQV4 416 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 CFAP54Q96N23 3096 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 SDK1Q7Z5N4 2213 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 SHISA7A6NL88 538 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF705FA8MVS1 300 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF732B4DXR9 585 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 NPIPA2E9PIF3 369 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 LMO7DNF2Z398 122 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 NPIPA3F8WFD2 350 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 DHHO43323 396 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 LCATP04180 440 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF705DP0CH99 300 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF705BP0CI00 300 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 EPHA1P21709 976 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 GNRHRP30968 328 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 LTBRP36941 435 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 GNB2P62879 340 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF154Q13106 437 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 DCAF10Q5QP82 559 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF66Q6ZN08 573 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 TBC1D26Q86UD7 250 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 IL22RA1Q8N6P7 574 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 RNASE8Q8TDE3 154 aaKnown RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ACTR3CQ9C0K3 210 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 TMEM222Q9H0R3 208 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 C11orf1Q9H5F2 150 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ASCL3Q9NQ33 180 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 SIAH2O43255 324 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 OR7C1O76099 320 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 BPIFB3P59826 476 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 MAML2Q8IZL2 1156 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ZNF501Q96CX3 271 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 ULBP2Q9BZM5 246 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 CALHM2Q9HA72 323 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 LPAR2Q9HBW0 351 aa7.91□□□□□ -1.14
CAPN3-206ENST00000397163 POLR3KQ9Y2Y1 108 aaPredicted RBP7.91□□□□□ -1.14
CAPN3-206ENST00000397163 IGKV1-12A0A0C4DH73 117 aa7.9□□□□□ -1.14
CAPN3-206ENST00000397163 CLDN34H7C241 214 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms