RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 CHCHD6Q9BRQ6 235 aa13.76□□□□□ -0.21
EXOSC3-202ENST00000396521 PPIL3Q9H2H8 161 aaKnown RBP13.76□□□□□ -0.21
EXOSC3-202ENST00000396521 ZCCHC4Q9H5U6 513 aa13.76□□□□□ -0.21
EXOSC3-202ENST00000396521 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
EXOSC3-202ENST00000396521 KIF25Q9UIL4 384 aa13.76□□□□□ -0.21
EXOSC3-202ENST00000396521 NCBP2LA6PVI3 153 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 SEC14L6B5MCN3 397 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 H0YJX3 145 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 TMEM225BP0DP42 221 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 GZMHP20718 246 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 ECI1P42126 302 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 GPR12P47775 334 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 TP53I3Q53FA7 332 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 PAN3Q58A45 887 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 LCNL1Q6ZST4 164 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 IZUMO1Q8IYV9 350 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 OR13C3Q8NGS6 347 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 TRUB1Q8WWH5 349 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 MRPL48Q96GC5 212 aaKnown RBP13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 GABARAPL1Q9H0R8 117 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 ING3Q9NXR8 418 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 LINC00527Q9UJ94 153 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 ZNF580Q9UK33 172 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 MYRFQ9Y2G1 1151 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 ZNF256Q9Y2P7 627 aaPredicted RBP13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 AP4S1Q9Y587 144 aa13.75□□□□□ -0.21
EXOSC3-202ENST00000396521 HSD17B6O14756 317 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 MITFO75030 526 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 RPLP1P05386 114 aaKnown RBP13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 HTR1AP08908 422 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 OR5H8P0DN80 308 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 LUMP51884 338 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 ZNF85Q03923 595 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 IL13RA2Q14627 380 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 KISS1Q15726 138 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 ATP6AP1Q15904 470 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 ZFP1Q6P2D0 407 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 SERPINA12Q8IW75 414 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 C8orf31Q8N9H6 132 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 PXT1Q8NFP0 134 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 OR52M1Q8NGK5 317 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 OR5D18Q8NGL1 313 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 OR13A1Q8NGR1 328 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 MUC7Q8TAX7 377 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 CNIH3Q8TBE1 160 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 C4orf3Q8WVX3 66 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 PYDC1Q8WXC3 89 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 RNF166Q96A37 237 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 EAF1Q96JC9 268 aaPredicted RBP13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 FAM118AQ9NWS6 357 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 SCOCQ9UIL1 159 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 SMAD5-AS1Q9Y6J3 95 aa13.74□□□□□ -0.21
EXOSC3-202ENST00000396521 IGHV1-3A0A0C4DH29 117 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 SLC16A6O15403 523 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 IGHG4P01861 327 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 FASP25445 335 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 CD1BP29016 333 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 UTF1Q5T230 341 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 MOB3BQ86TA1 216 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 EME1Q96AY2 570 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 DUX3Q96PT4 197 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 SPACA5Q96QH8 159 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 PRR25Q96S07 402 aa13.73□□□□□ -0.21
EXOSC3-202ENST00000396521 TRAV24A0A0B4J272 114 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 DAPL1A0PJW8 107 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 SULT1B1O43704 296 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 HCKP08631 526 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 IL3RAP26951 378 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 ZP1P60852 638 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 FHL3Q13643 280 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 DOC2BQ14184 412 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 Q3ZCU0 254 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 CASC10Q5T4H9 136 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 RSBN1Q5VWQ0 802 aaPredicted RBP13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 LINC00311Q8N616 119 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 Q8N6K4 173 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 LEAP2Q969E1 77 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 RASL11BQ9BPW5 248 aa13.72□□□□□ -0.21
EXOSC3-202ENST00000396521 SNTNA6NMZ2 147 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 ANKRD65E5RJM6 399 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 MAGEB3O15480 346 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 TXNL1O43396 289 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 MOSP00540 346 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 VDAC1P21796 283 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 GNG10P50151 68 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 NANOS3P60323 173 aaKnown RBP13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 MRPL28Q13084 256 aaKnown RBP13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 DIAPH2-AS1Q14236 149 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 ZNF691Q5VV52 312 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 PARP16Q8N5Y8 322 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 ACBD7Q8N6N7 88 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 Q8N9W7 124 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 RFESDQ8TAC1 157 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 MRGPRDQ8TDS7 321 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 CIB1Q99828 191 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 GABARAPL3Q9BY60 117 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 RIBC2Q9H4K1 309 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 RAB9BQ9NP90 201 aa13.71□□□□□ -0.21
EXOSC3-202ENST00000396521 OR4C45A6NMZ5 311 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms