RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 MIDNQ504T8 468 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 OR56B2PQ8NGI1 322 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 EXTL1Q92935 676 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 MEGF10Q96KG7 1140 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 PARD6AQ9NPB6 346 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 RCL1Q9Y2P8 373 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 TNRC6AQ8NDV7 1962 aaKnown RBP13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 ASPMQ8IZT6 3477 aa13.73□□□□□ -0.21
CCHCR1-202ENST00000396263 ARG1P05089 322 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 UNQ6494/PRO21346Q6UXR6 183 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 SCRT1Q9BWW7 348 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 TMEM222Q9H0R3 208 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 C11orf1Q9H5F2 150 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 SLC7A10Q9NS82 523 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 LRFN1Q9P244 771 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 EP300Q09472 2414 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 PCNX2A6NKB5 2137 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 FREM1Q5H8C1 2179 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 BCL3P20749 454 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 LMO1P25800 156 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 GNRHRP30968 328 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 FGF12P61328 243 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 RND3P61587 244 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 ARF1P84077 181 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 SPINK14Q6IE38 97 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 TMEM56Q96MV1 263 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 FGF23Q9GZV9 251 aaPredicted RBP13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 PARP12Q9H0J9 701 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 PRDM13Q9H4Q3 707 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 STRAPQ9Y3F4 350 aaKnown RBP13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 TMEM56-RWDD3S4R434 201 aa13.72□□□□□ -0.21
CCHCR1-202ENST00000396263 CXorf65A6NEN9 183 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 TRDCB7Z8K6 153 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 NAPSAO96009 420 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 COX5BP10606 129 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 NHLH2Q02577 135 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 TCF15Q12870 199 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 PRDX4Q13162 271 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 GNMTQ14749 295 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 MEX3BQ6ZN04 569 aaKnown RBP13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 BOD1Q96IK1 185 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 ZPBPQ9BS86 351 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 OPA3Q9H6K4 179 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 Q9N2K0 584 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 NME2P1O60361 137 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 F10P00742 488 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 CAMLGP49069 296 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 LHX2P50458 406 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 NUBP1P53384 320 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 STX12Q86Y82 276 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 ZNF565Q8N9K5 539 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 KDF1Q8NAX2 398 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 FAM173AQ9BQD7 235 aa13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 ZNF703Q9H7S9 590 aaPredicted RBP13.71□□□□□ -0.21
CCHCR1-202ENST00000396263 A0A1W2PNU3 283 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 ZNF616Q08AN1 781 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 GUK1Q16774 197 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 CEACAM21Q3KPI0 293 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 CDCP2Q5VXM1 449 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 BATF2Q8N1L9 274 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 C19orf12Q9NSK7 152 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 A0A1W2PPE2 198 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 NKX2-6A6NCS4 301 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 SS18L1O75177 396 aaPredicted RBP13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 NEURL1O76050 574 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 TK1P04183 234 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 CLDN18P56856 261 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 EWSR1Q01844 656 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 MPV17LQ2QL34 196 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 TBC1D26Q86UD7 250 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 ZDHHC23Q8IYP9 409 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 PRSS33Q8NF86 280 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 OR2M7Q8NG81 312 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 THOC3Q96J01 351 aaKnown RBP13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 SH3BGRL3Q9H299 93 aa13.7□□□□□ -0.22
CCHCR1-202ENST00000396263 ARGFXA6NJG6 315 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 M0R036 132 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 NOVA1P51513 510 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 GPM6AP51674 278 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 OR2C3Q8N628 320 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 APOBEC3DQ96AK3 386 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 ABHD14BQ96IU4 210 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 SPIN2AQ99865 258 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 SPIN2BQ9BPZ2 258 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 STRADBQ9C0K7 418 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 TUBA4BQ9H853 241 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 CRIM1Q9NZV1 1036 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 A0A096LPE4 126 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 A0A1W2PPZ6 126 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 C5orf49A4QMS7 147 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 SLC31A2O15432 143 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 CCNOP22674 350 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 FHITP49789 147 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 DHRS13Q6UX07 377 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 MRPL21Q7Z2W9 205 aaKnown RBP13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 MALSU1Q96EH3 234 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 SPRY4Q9C004 299 aa13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 UBE2J1Q9Y385 318 aaPredicted RBP13.69□□□□□ -0.22
CCHCR1-202ENST00000396263 DUXBA0A1W2PPF3 345 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms