RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ZNF324BQ6AW86 544 aaPredicted RBP14.27□□□□□ -0.12
NUP50-202ENST00000396096 MOB1BQ7L9L4 216 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 SELENOHQ8IZQ5 122 aaKnown RBP14.27□□□□□ -0.12
NUP50-202ENST00000396096 SCCPDHQ8NBX0 429 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 DMBX1Q8NFW5 382 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 RDH5Q92781 318 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 ABHD14BQ96IU4 210 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 C11orf1Q9H5F2 150 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 ZDHHC8Q9ULC8 765 aa14.27□□□□□ -0.12
NUP50-202ENST00000396096 UBE2J1Q9Y385 318 aaPredicted RBP14.27□□□□□ -0.12
NUP50-202ENST00000396096 LOC105371267A0A1B0GV96 52 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 TMEM218A2RU14 115 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 CLEC18AA5D8T8 446 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 HS3ST1O14792 307 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 ACAA1P09110 424 aaPredicted RBP14.27□□□□□ -0.13
NUP50-202ENST00000396096 WNT2P09544 360 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 UCP2P55851 309 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 PJVKQ0ZLH3 352 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 SPIN3Q5JUX0 258 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 MEX3BQ6ZN04 569 aaKnown RBP14.27□□□□□ -0.13
NUP50-202ENST00000396096 H1FOOQ8IZA3 346 aaPredicted RBP14.27□□□□□ -0.13
NUP50-202ENST00000396096 CLEC18CQ8NCF0 446 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 SLC25A40Q8TBP6 338 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 IL22RA2Q969J5 263 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 ERGIC1Q969X5 290 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 SPIN2AQ99865 258 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 SPIN2BQ9BPZ2 258 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 NRIP2Q9BQI9 281 aa14.27□□□□□ -0.13
NUP50-202ENST00000396096 A0A1W2PR80 420 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 TMEM210A6NLX4 147 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 PRR33A8MZF0 331 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 IGKV3-15P01624 115 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 PGA5P0DJD9 388 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 BLOC1S1P78537 153 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 ZNF695Q8IW36 515 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.26□□□□□ -0.13
NUP50-202ENST00000396096 C9orf106Q8NAJ2 232 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 ADAT1Q9BUB4 502 aaKnown RBP14.26□□□□□ -0.13
NUP50-202ENST00000396096 CCL28Q9NRJ3 127 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 RCL1Q9Y2P8 373 aaKnown RBP14.26□□□□□ -0.13
NUP50-202ENST00000396096 OR2W1Q9Y3N9 320 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
NUP50-202ENST00000396096 NKX2-6A6NCS4 301 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 H0Y980 276 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 WISP2O76076 250 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ZNF44P15621 663 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ERVS71-1P61550 626 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ZNF146Q15072 292 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 C10orf91Q5T1B1 145 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 PXDC1Q5TGL8 231 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 CMTM1Q8IZ96 169 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 BOLLQ8N9W6 283 aaKnown RBP14.25□□□□□ -0.13
NUP50-202ENST00000396096 WDR31Q8NA23 367 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 OR5D13Q8NGL4 314 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 LILRB1Q8NHL6 650 aaPredicted RBP14.25□□□□□ -0.13
NUP50-202ENST00000396096 LRRC46Q96FV0 321 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 KIRREL1Q96J84 757 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 PARP11Q9NR21 331 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 PLA2G2EQ9NZK7 142 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 SPINK2P20155 84 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 TUBG1P23258 451 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 NOVA1P51513 510 aaKnown RBP14.25□□□□□ -0.13
NUP50-202ENST00000396096 PSG7Q13046 419 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ZNF154Q13106 437 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ZNF273Q14593 569 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ATRAIDQ6UW56 229 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 ZNF497Q6ZNH5 498 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 OR1J1Q8NGS3 322 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 OR10J5Q8NHC4 309 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 TUBG2Q9NRH3 451 aa14.25□□□□□ -0.13
NUP50-202ENST00000396096 BORCS7-ASMTA0A0B4J1R7 106 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 PIGBOS1A0A0B4J2F0 54 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 ZNF891A8MT65 544 aaPredicted RBP14.24□□□□□ -0.13
NUP50-202ENST00000396096 AHRRA9YTQ3 701 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 SLC33A1O00400 549 aaPredicted RBP14.24□□□□□ -0.13
NUP50-202ENST00000396096 ABCD4O14678 606 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 HSD17B6O14756 317 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 ATG12O94817 140 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 LPAR6P43657 344 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 GNMTQ14749 295 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 IGFBP7Q16270 282 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 ALKBH6Q3KRA9 238 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 ACSF3Q4G176 576 aaPredicted RBP14.24□□□□□ -0.13
NUP50-202ENST00000396096 NMSQ5H8A3 153 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 BTNL8Q6UX41 500 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 CNEP1R1Q8N9A8 125 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 BSCL2Q96G97 398 aaPredicted RBP14.24□□□□□ -0.13
NUP50-202ENST00000396096 NARS2Q96I59 477 aaKnown RBP14.24□□□□□ -0.13
NUP50-202ENST00000396096 GINS3Q9BRX5 216 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 SMIM3Q9BZL3 60 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 PLSCR4Q9NRQ2 329 aa14.24□□□□□ -0.13
NUP50-202ENST00000396096 TTC28Q96AY4 2481 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 MED6O75586 246 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 PGLYRP1O75594 196 aaPredicted RBP14.23□□□□□ -0.13
NUP50-202ENST00000396096 OR2H2O95918 312 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 SEC11BP0C7V7 166 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 VDAC1P21796 283 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 CAV2P51636 162 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 DEFB109BQ30KR1 87 aa14.23□□□□□ -0.13
NUP50-202ENST00000396096 VWA1Q6PCB0 445 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms